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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS14760 and ABZR86_RS14765 are separated by 66 nucleotides
ABZR86_RS14765 and ABZR86_RS14770 are separated by 81 nucleotides
ABZR86_RS14770 and ABZR86_RS14775 are separated by 12 nucleotides
ABZR86_RS14775 and ABZR86_RS14780 are separated by 30 nucleotides
ABZR86_RS14760: ABZR86_RS14760 - hypothetical protein, at 3,318,159 to 3,318,686
_RS14760
ABZR86_RS14765: ABZR86_RS14765 - DHA2 family efflux MFS transporter permease subunit, at 3,318,753 to 3,320,282
_RS14765
ABZR86_RS14770: ABZR86_RS14770 - HlyD family efflux transporter periplasmic adaptor subunit, at 3,320,364 to 3,321,551
_RS14770
ABZR86_RS14775: ABZR86_RS14775 - efflux transporter outer membrane subunit, at 3,321,564 to 3,323,042
_RS14775
ABZR86_RS14780: ABZR86_RS14780 - MarR family transcriptional regulator, at 3,323,073 to 3,323,522
_RS14780
Group
Condition
ABZR86
_RS14760
ABZR86
_RS14765
ABZR86
_RS14770
ABZR86
_RS14775
ABZR86
_RS14780
stress
Tetracycline 0.024 mg/ml
+0.5
-0.7
-0.5
-0.6
-0.2
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.5
+0.1
-0.0
+0.0
-0.7
carbon source
NAG (C)
-0.4
-0.0
+0.1
-0.0
-0.8
nitrogen source
N-Acetyl-D-glucosamine (N)
-0.5
+0.0
-0.0
+0.1
-0.7
stress
Sisomicin 0.016 mg/ml
+0.1
-0.5
-0.4
-0.4
+0.1
stress
Tetracycline 0.012 mg/ml
-0.1
-0.2
-0.2
-0.2
-0.2
carbon source
D-Maltose (C)
-0.1
-0.0
-0.0
-0.2
-0.5
stress
Nalidixic 0.08 mg/ml
-0.4
-0.2
-0.4
-0.2
+0.3
carbon source
D-Glucose (C)
-0.0
-0.1
-0.1
-0.1
-0.5
stress
Chloride 250 mM
-0.1
-0.1
-0.2
+0.0
-0.4
stress
Nalidixic 0.01 mg/ml
-0.3
-0.4
-0.4
-0.3
+0.6
carbon source
D-Galactose (C)
-0.2
+0.1
-0.0
+0.1
-0.6
carbon source
NAG (C)
-0.3
+0.1
+0.0
+0.1
-0.6
carbon source
D-Fructose (C)
-0.1
-0.0
-0.0
+0.1
-0.5
carbon source
D-Fructose (C)
-0.2
+0.1
-0.0
+0.0
-0.5
nitrogen source
L-Isoleucine (N)
-0.1
-0.3
-0.3
-0.3
+0.4
nitrogen source
Glucuronamide (N)
-0.1
+0.0
+0.1
+0.1
-0.6
nitrogen source
nitrate (N)
-0.2
+0.0
+0.0
+0.1
-0.4
carbon source
L-Alanine (C)
-0.1
+0.1
+0.2
+0.1
-0.7
carbon source
pyruvate (C)
-0.1
+0.0
+0.1
+0.1
-0.5
carbon source
L-Alanine (C)
-0.1
+0.0
+0.1
+0.1
-0.6
nitrogen source
L-Asparagine (N)
+0.2
+0.0
-0.2
-0.3
-0.2
stress
Paraquat dichloride 0.1 mg/ml
-0.1
-0.2
+0.1
+0.2
-0.4
stress
Spectinomycin 0.04 mg/ml
+0.3
-0.1
-0.1
+0.1
-0.5
stress
Nalidixic 0.02 mg/ml
-0.2
-0.3
-0.2
-0.2
+0.6
stress
Nalidixic 0.04 mg/ml
-0.3
-0.3
-0.2
-0.3
+0.9
nitrogen source
L-Leucine (N)
+0.0
-0.1
-0.1
-0.1
+0.4
stress
Chlorite 0.32 mM
-0.1
+0.4
+0.3
+0.2
-0.3
stress
Fusidic 0.2 mg/ml
+0.9
+0.0
+0.2
+0.2
-0.6
stress
Fusidic 0.4 mg/ml
+2.9
-0.0
-0.1
+0.0
-0.3
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