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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS14515 and ABZR86_RS14520 are separated by 31 nucleotides
ABZR86_RS14520 and ABZR86_RS14525 are separated by 77 nucleotides
ABZR86_RS14525 and ABZR86_RS14530 overlap by 8 nucleotides
ABZR86_RS14530 and ABZR86_RS14535 are separated by 40 nucleotides
ABZR86_RS14515: ABZR86_RS14515 - tail fiber protein, at 3,254,669 to 3,255,199
_RS14515
ABZR86_RS14520: ABZR86_RS14520 - tail fiber protein, at 3,255,231 to 3,255,770
_RS14520
ABZR86_RS14525: ABZR86_RS14525 - GNAT family N-acetyltransferase, at 3,255,848 to 3,256,330
_RS14525
ABZR86_RS14530: ABZR86_RS14530 - hypothetical protein, at 3,256,323 to 3,256,619
_RS14530
ABZR86_RS14535: ABZR86_RS14535 - hypothetical protein, at 3,256,660 to 3,256,887
_RS14535
Group
Condition
ABZR86
_RS14515
ABZR86
_RS14520
ABZR86
_RS14525
ABZR86
_RS14530
ABZR86
_RS14535
stress
Nalidixic 0.08 mg/ml
-0.2
-0.4
-0.4
-0.2
-0.5
nitrogen source
L-Asparagine (N)
+0.3
-0.5
+0.9
+0.1
-2.2
lb
LB
-0.1
-0.1
-0.2
-0.1
-0.5
nitrogen source
Glucuronamide (N)
-0.1
+0.1
-0.2
-0.4
-0.4
carbon source
a-Cyclodextrin (C)
-0.0
-0.1
-0.2
+0.2
-0.8
stress
A22 0.01 mg/ml
-0.1
-0.1
-0.1
-0.3
-0.2
lb
LB
-0.0
-0.1
-0.2
-0.6
+0.3
nitrogen source
L-Leucine (N)
+0.0
+0.3
-0.2
-0.2
-0.3
carbon source
D-Fructose (C)
-0.1
-0.2
-0.0
+0.5
-0.5
stress
sodium fluoride 40 mM
-0.1
-0.2
+0.2
-0.6
+0.4
lb
LB
-0.1
-0.1
-0.2
+0.9
-0.5
lb
LB
-0.2
-0.2
-0.3
+0.3
+0.3
stress
perchlorate 75 mM
+0.0
+0.0
-0.2
-0.3
+0.4
stress
Chloramphenicol 0.012 mg/ml
+0.1
+0.1
+0.1
-0.9
+0.7
stress
Paraquat dichloride 0.05 mg/ml
-0.0
-0.2
-0.2
+0.5
+0.2
carbon source
D-Cellobiose (C)
-0.3
+0.3
+0.1
-0.3
+0.4
carbon source
pyruvate (C)
-0.1
+0.3
-0.2
+0.3
+0.1
stress
Thallium(I) acetate 0.016 mg/ml
-0.1
+0.1
+0.1
-0.2
+0.5
carbon source
D-Fructose (C)
-0.1
-0.1
-0.0
+0.2
+0.5
stress
sodium fluoride 60 mM
-0.1
+0.1
-0.1
+0.3
+0.3
carbon source
NAG (C)
-0.2
+0.1
-0.1
+0.8
-0.1
nitrogen source
L-Arginine (N)
-0.1
+0.1
-0.1
+0.2
+0.5
carbon source
NAG (C)
-0.2
+0.1
+0.1
+0.3
+0.3
nitrogen source
N-Acetyl-D-glucosamine (N)
-0.1
+0.2
-0.1
+0.3
+0.3
stress
Chloramphenicol 0.008 mg/ml
-0.1
-0.1
+0.4
+0.2
+0.2
carbon source
L-Alanine (C)
-0.1
+0.3
-0.1
+0.4
+0.2
carbon source
D-Galactose (C)
-0.1
+0.1
+0.1
+0.3
+0.5
stress
Tetracycline 0.024 mg/ml
-0.1
-0.0
+0.3
+0.5
+0.2
stress
nitrite 6 mM
+0.1
+0.2
+0.2
+0.1
+0.3
stress
Thallium(I) acetate 0.008 mg/ml
+0.0
+0.2
-0.0
+0.6
+0.1
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