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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS14345 and ABZR86_RS14350 are separated by 331 nucleotides
ABZR86_RS14350 and ABZR86_RS14355 overlap by 4 nucleotides
ABZR86_RS14355 and ABZR86_RS14360 overlap by 4 nucleotides
ABZR86_RS14360 and ABZR86_RS14365 are separated by 260 nucleotides
ABZR86_RS14345: ABZR86_RS14345 - LysR substrate-binding domain-containing protein, at 3,198,262 to 3,199,122
_RS14345
ABZR86_RS14350: ABZR86_RS14350 - LysM domain-containing protein, at 3,199,454 to 3,200,389
_RS14350
ABZR86_RS14355: ABZR86_RS14355 - serine/threonine-protein kinase, at 3,200,386 to 3,202,089
_RS14355
ABZR86_RS14360: ABZR86_RS14360 - FHA domain-containing protein, at 3,202,086 to 3,202,613
_RS14360
ABZR86_RS14365: ABZR86_RS14365 - XVIPCD domain-containing protein, at 3,202,874 to 3,204,259
_RS14365
Group
Condition
ABZR86
_RS14345
ABZR86
_RS14350
ABZR86
_RS14355
ABZR86
_RS14360
ABZR86
_RS14365
stress
Fusidic 0.4 mg/ml
-0.4
-0.0
-0.3
-0.1
-0.2
carbon source
NAG (C)
-0.1
-0.2
-0.2
-0.2
-0.1
carbon source
D-Fructose (C)
+0.0
-0.1
-0.1
-0.5
-0.1
carbon source
pyruvate (C)
-0.1
-0.0
-0.0
-0.3
-0.1
carbon source
D-Cellobiose (C)
+0.0
-0.2
-0.0
-0.2
-0.2
stress
Nalidixic 0.08 mg/ml
-0.1
-0.2
-0.1
-0.2
+0.0
stress
Thallium(I) acetate 0.016 mg/ml
+0.1
-0.1
-0.1
-0.2
-0.2
carbon source
D-Glucose (C)
-0.2
+0.0
-0.0
-0.1
-0.1
nitrogen source
L-Lysine (N)
-0.0
-0.0
-0.2
-0.0
-0.2
stress
Chloride 250 mM
-0.2
-0.2
-0.1
+0.2
-0.1
carbon source
a-Cyclodextrin (C)
-0.1
+0.1
-0.0
-0.3
-0.1
stress
Nalidixic 0.02 mg/ml
-0.0
-0.2
+0.1
+0.0
-0.2
stress
Spectinomycin 0.04 mg/ml
+0.1
-0.2
+0.0
-0.0
-0.2
stress
Fusidic 0.2 mg/ml
+0.1
+0.2
-0.1
-0.2
-0.2
lb
LB
-0.2
+0.2
+0.0
+0.0
-0.2
carbon source
L-Proline (C)
+0.1
-0.0
-0.1
-0.1
-0.1
carbon source
pyruvate (C)
-0.1
+0.1
-0.1
+0.1
-0.1
lb
LB
+0.1
+0.0
-0.2
-0.0
-0.0
stress
Nalidixic 0.01 mg/ml
+0.0
-0.1
+0.1
+0.1
-0.2
nitrogen source
L-Proline (N)
+0.2
+0.2
-0.2
-0.0
-0.0
stress
Chloramphenicol 0.008 mg/ml
+0.2
-0.0
+0.2
-0.0
-0.2
nitrogen source
L-Asparagine (N)
+0.4
+0.1
+0.2
-0.2
-0.2
stress
Chlorite 0.32 mM
+0.1
+0.0
-0.0
+0.2
-0.1
nitrogen source
Casamino Acids (N)
+0.2
+0.0
+0.1
-0.1
+0.0
carbon source
D-Fructose (C)
+0.2
+0.2
+0.2
-0.1
-0.2
lb
LB
+0.2
+0.1
+0.0
-0.1
+0.1
carbon source
D-Maltose (C)
+0.0
+0.0
+0.1
+0.2
-0.1
stress
Dimethyl Sulfoxide 7.5 vol%
+0.1
-0.0
+0.2
+0.1
-0.1
stress
Cisplatin 0.0032 mg/ml
+0.1
-0.0
+0.2
+0.2
-0.1
nitrogen source
L-Leucine (N)
+0.1
+0.1
-0.0
+0.1
+0.2
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