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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS14320 and ABZR86_RS14325 are separated by 143 nucleotides
ABZR86_RS14325 and ABZR86_RS14330 are separated by 283 nucleotides
ABZR86_RS14330 and ABZR86_RS14335 are separated by 282 nucleotides
ABZR86_RS14335 and ABZR86_RS14340 are separated by 380 nucleotides
ABZR86_RS14320: ABZR86_RS14320 - RICIN domain-containing protein, at 3,189,781 to 3,190,233
_RS14320
ABZR86_RS14325: ABZR86_RS14325 - EamA family transporter, at 3,190,377 to 3,191,261
_RS14325
ABZR86_RS14330: ABZR86_RS14330 - TonB-dependent receptor, at 3,191,545 to 3,193,992
_RS14330
ABZR86_RS14335: ABZR86_RS14335 - glycoside hydrolase family 3 protein, at 3,194,275 to 3,196,737
_RS14335
ABZR86_RS14340: ABZR86_RS14340 - LacI family DNA-binding transcriptional regulator, at 3,197,118 to 3,198,131
_RS14340
Group
Condition
ABZR86
_RS14320
ABZR86
_RS14325
ABZR86
_RS14330
ABZR86
_RS14335
ABZR86
_RS14340
stress
Paraquat dichloride 0.1 mg/ml
-0.7
-0.1
+0.0
-0.1
-0.0
stress
Nalidixic 0.02 mg/ml
-0.5
+0.0
-0.1
-0.2
-0.1
stress
Spectinomycin 0.04 mg/ml
+0.2
-0.3
-0.1
-0.1
-0.4
lb
LB
-0.5
+0.0
+0.0
-0.3
+0.0
stress
Tetracycline 0.024 mg/ml
+0.3
-0.1
-0.0
-0.1
-0.6
lb
LB
-0.4
-0.1
+0.1
-0.0
-0.1
nitrogen source
L-Isoleucine (N)
-0.3
+0.1
+0.1
-0.1
-0.1
nitrogen source
L-Arginine (N)
-0.3
+0.2
-0.1
-0.1
-0.1
stress
Thallium(I) acetate 0.008 mg/ml
-0.3
-0.2
+0.2
-0.1
+0.2
stress
Zinc 2.5 mM
+0.2
-0.1
+0.1
-0.3
-0.1
nitrogen source
L-Asparagine (N)
-0.2
-0.4
+0.3
+0.4
-0.3
nitrogen source
L-Leucine (N)
+0.2
+0.0
-0.1
+0.0
-0.3
carbon source
a-Cyclodextrin (C)
-0.3
+0.0
+0.0
-0.2
+0.2
stress
Cisplatin 0.0032 mg/ml
-0.3
+0.1
-0.1
-0.0
+0.1
nitrogen source
L-Proline (N)
-0.5
+0.1
-0.1
+0.1
+0.2
stress
Chloramphenicol 0.008 mg/ml
-0.0
-0.0
+0.0
+0.3
-0.3
stress
perchlorate 75 mM
+0.1
-0.2
+0.1
-0.2
+0.1
carbon source
D-Cellobiose (C)
-0.4
+0.0
+0.0
+0.7
-0.3
stress
Paraquat dichloride 0.2 mg/ml
+0.4
-0.1
-0.1
-0.0
-0.1
carbon source
pyruvate (C)
+0.4
+0.0
-0.1
-0.2
-0.1
nitrogen source
L-Lysine (N)
+0.3
-0.1
-0.1
+0.1
-0.1
stress
nitrate 150 mM
+0.4
-0.1
+0.1
-0.2
+0.0
stress
nitrite 6 mM
+0.2
-0.2
-0.0
+0.1
+0.2
stress
A22 0.02 mg/ml
+0.5
-0.1
+0.0
-0.1
+0.1
carbon source
L-Proline (C)
+0.4
-0.0
-0.1
-0.1
+0.1
nitrogen source
nitrate (N)
+0.4
+0.0
-0.0
+0.2
+0.1
carbon source
D-Glucose (C)
+0.3
+0.1
+0.0
-0.1
+0.3
carbon source
D-Galactose (C)
+0.1
-0.1
+0.0
-0.0
+0.7
carbon source
D-Cellobiose (C)
-0.1
+0.1
+0.1
+0.7
+0.1
stress
Chloramphenicol 0.012 mg/ml
+0.4
+0.1
+0.1
+0.1
+0.2
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