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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS14295 and ABZR86_RS14300 are separated by 640 nucleotides
ABZR86_RS14300 and ABZR86_RS14305 overlap by 4 nucleotides
ABZR86_RS14305 and ABZR86_RS14310 are separated by 76 nucleotides
ABZR86_RS14310 and ABZR86_RS14315 are separated by 146 nucleotides
ABZR86_RS14295: ABZR86_RS14295 - NAD(P)/FAD-dependent oxidoreductase, at 3,180,970 to 3,182,637
_RS14295
ABZR86_RS14300: ABZR86_RS14300 - PAS and helix-turn-helix domain-containing protein, at 3,183,278 to 3,184,084
_RS14300
ABZR86_RS14305: ABZR86_RS14305 - glycoside hydrolase family 30 beta sandwich domain-containing protein, at 3,184,081 to 3,185,601
_RS14305
ABZR86_RS14310: ABZR86_RS14310 - winged helix-turn-helix domain-containing protein, at 3,185,678 to 3,188,068
_RS14310
ABZR86_RS14315: ABZR86_RS14315 - antibiotic hydrolase, at 3,188,215 to 3,189,393
_RS14315
Group
Condition
ABZR86
_RS14295
ABZR86
_RS14300
ABZR86
_RS14305
ABZR86
_RS14310
ABZR86
_RS14315
lb
LB
-0.0
-0.1
+0.0
+0.0
-0.3
stress
Nalidixic 0.08 mg/ml
-0.2
+0.0
+0.1
-0.0
-0.2
stress
Fusidic 0.2 mg/ml
-0.1
+0.0
-0.1
-0.2
+0.2
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.3
+0.3
-0.1
-0.1
-0.1
carbon source
D-Fructose (C)
-0.1
+0.0
+0.0
+0.1
-0.2
nitrogen source
N-Acetyl-D-glucosamine (N)
-0.3
+0.4
+0.0
-0.1
-0.2
nitrogen source
L-Proline (N)
+0.1
+0.1
-0.1
+0.0
-0.2
stress
Chloramphenicol 0.012 mg/ml
-0.2
-0.1
+0.1
+0.0
+0.2
carbon source
D-Galactose (C)
-0.2
+0.3
-0.0
+0.1
-0.1
stress
Sisomicin 0.016 mg/ml
-0.2
+0.1
-0.2
+0.2
+0.0
stress
Carbenicillin 0.02 mg/ml
+0.1
+0.1
+0.2
-0.1
-0.3
stress
Spectinomycin 0.04 mg/ml
+0.2
-0.1
-0.2
+0.1
+0.1
stress
Zinc 2.5 mM
+0.0
+0.1
-0.2
+0.1
+0.2
nitrogen source
L-Leucine (N)
+0.1
+0.2
-0.1
+0.0
-0.0
carbon source
pyruvate (C)
-0.2
-0.1
-0.2
+0.2
+0.4
stress
perchlorate 75 mM
-0.1
+0.1
+0.2
+0.0
-0.0
lb
LB
-0.1
+0.3
-0.1
+0.2
-0.1
stress
Paraquat dichloride 0.2 mg/ml
+0.1
+0.0
-0.2
+0.1
+0.2
nitrogen source
L-Asparagine (N)
-0.0
+0.1
-0.2
+0.1
+0.3
nitrogen source
L-Lysine (N)
-0.1
-0.0
+0.0
+0.3
+0.1
stress
Thallium(I) acetate 0.016 mg/ml
-0.2
+0.4
+0.0
-0.1
+0.1
carbon source
NAG (C)
-0.1
+0.2
+0.1
+0.0
+0.1
stress
Chlorite 0.32 mM
+0.2
+0.0
+0.1
-0.0
+0.1
carbon source
D-Maltose (C)
+0.1
-0.0
-0.0
+0.1
+0.3
stress
Thallium(I) acetate 0.008 mg/ml
+0.1
-0.1
+0.0
+0.2
+0.2
carbon source
L-Alanine (C)
+0.1
+0.1
-0.1
+0.2
+0.1
carbon source
NAG (C)
-0.2
+0.3
+0.0
+0.1
+0.2
carbon source
D-Fructose (C)
+0.2
+0.1
+0.1
+0.2
-0.2
stress
Ceftazidime 0.1 mg/ml
+0.3
-0.0
+0.1
+0.1
+0.0
nitrogen source
nitrate (N)
+0.4
-0.0
+0.2
+0.1
-0.1
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