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Gene
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Cofit
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS13790 and ABZR86_RS13795 are separated by 73 nucleotides
ABZR86_RS13795 and ABZR86_RS13800 are separated by 313 nucleotides
ABZR86_RS13800 and ABZR86_RS13805 are separated by 190 nucleotides
ABZR86_RS13805 and ABZR86_RS13810 are separated by 66 nucleotides
ABZR86_RS13790: ABZR86_RS13790 - DUF6683 family protein, at 3,076,503 to 3,077,237
_RS13790
ABZR86_RS13795: ABZR86_RS13795 - hypothetical protein, at 3,077,311 to 3,077,991
_RS13795
ABZR86_RS13800: ABZR86_RS13800 - tRNA-Met, at 3,078,305 to 3,078,381
_RS13800
ABZR86_RS13805: ABZR86_RS13805 - RNA pyrophosphohydrolase, at 3,078,572 to 3,079,126
_RS13805
ABZR86_RS13810: ABZR86_RS13810 - (2Fe-2S)-binding protein, at 3,079,193 to 3,079,390
_RS13810
Group
Condition
ABZR86
_RS13790
ABZR86
_RS13795
ABZR86
_RS13800
ABZR86
_RS13805
ABZR86
_RS13810
stress
Thallium(I) acetate 0.008 mg/ml
-0.2
-0.3
N.D.
-0.8
N.D.
carbon source
D-Cellobiose (C)
-0.5
-0.1
N.D.
-0.5
N.D.
stress
Fusidic 0.2 mg/ml
-0.0
-0.7
N.D.
-0.3
N.D.
carbon source
NAG (C)
+0.1
-0.2
N.D.
-0.7
N.D.
stress
Thallium(I) acetate 0.016 mg/ml
-0.1
-0.1
N.D.
-0.6
N.D.
stress
Sisomicin 0.016 mg/ml
-0.1
+0.3
N.D.
-0.9
N.D.
carbon source
D-Glucose (C)
-0.2
+0.0
N.D.
-0.6
N.D.
carbon source
a-Cyclodextrin (C)
-0.1
-0.1
N.D.
-0.6
N.D.
carbon source
L-Alanine (C)
+0.1
-0.1
N.D.
-0.7
N.D.
nitrogen source
nitrate (N)
-0.1
-0.3
N.D.
-0.2
N.D.
nitrogen source
L-Arginine (N)
-0.4
+0.1
N.D.
-0.4
N.D.
stress
Paraquat dichloride 0.1 mg/ml
-0.2
+0.0
N.D.
-0.5
N.D.
nitrogen source
L-Isoleucine (N)
-0.6
+0.2
N.D.
-0.3
N.D.
carbon source
D-Galactose (C)
-0.1
+0.3
N.D.
-0.8
N.D.
carbon source
a-Cyclodextrin (C)
+0.1
-0.0
N.D.
-0.5
N.D.
carbon source
D-Maltose (C)
-0.0
+0.1
N.D.
-0.5
N.D.
stress
Chloramphenicol 0.012 mg/ml
-0.4
+0.1
N.D.
-0.2
N.D.
carbon source
NAG (C)
+0.2
-0.1
N.D.
-0.4
N.D.
nitrogen source
Glucuronamide (N)
-0.5
+0.4
N.D.
-0.2
N.D.
carbon source
L-Alanine (C)
+0.0
+0.4
N.D.
-0.8
N.D.
stress
Tetracycline 0.024 mg/ml
+0.1
-0.4
N.D.
+0.2
N.D.
stress
Cisplatin 0.0032 mg/ml
-0.0
+0.4
N.D.
-0.4
N.D.
stress
Spectinomycin 0.04 mg/ml
+0.4
-0.2
N.D.
+0.0
N.D.
stress
Paraquat dichloride 0.2 mg/ml
+0.2
+0.3
N.D.
-0.2
N.D.
stress
Zinc 2.5 mM
+0.4
+0.2
N.D.
-0.3
N.D.
stress
Paraquat dichloride 0.05 mg/ml
+0.3
+0.2
N.D.
-0.1
N.D.
stress
Carbenicillin 0.02 mg/ml
+0.5
+0.1
N.D.
-0.0
N.D.
stress
Nalidixic 0.08 mg/ml
+0.2
-0.0
N.D.
+0.5
N.D.
carbon source
L-Proline (C)
+0.2
+0.5
N.D.
+0.1
N.D.
lb
LB
+0.4
+0.2
N.D.
+0.2
N.D.
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