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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS13520 and ABZR86_RS13525 are separated by 44 nucleotides
ABZR86_RS13525 and ABZR86_RS13530 are separated by 78 nucleotides
ABZR86_RS13530 and ABZR86_RS13535 are separated by 144 nucleotides
ABZR86_RS13535 and ABZR86_RS13540 overlap by 4 nucleotides
ABZR86_RS13520: ABZR86_RS13520 - hypothetical protein, at 3,028,820 to 3,029,479
_RS13520
ABZR86_RS13525: ABZR86_RS13525 - oxygen-dependent coproporphyrinogen oxidase, at 3,029,524 to 3,030,426
_RS13525
ABZR86_RS13530: ABZR86_RS13530 - YdcF family protein, at 3,030,505 to 3,031,215
_RS13530
ABZR86_RS13535: ABZR86_RS13535 - beta-ketoacyl-[acyl-carrier-protein] synthase family protein, at 3,031,360 to 3,032,544
_RS13535
ABZR86_RS13540: ABZR86_RS13540 - beta-ketoacyl synthase chain length factor, at 3,032,541 to 3,033,341
_RS13540
Group
Condition
ABZR86
_RS13520
ABZR86
_RS13525
ABZR86
_RS13530
ABZR86
_RS13535
ABZR86
_RS13540
stress
Fusidic 0.4 mg/ml
-0.3
N.D.
-0.8
-1.0
-0.8
stress
Fusidic 0.2 mg/ml
-0.3
N.D.
-0.6
-1.2
-0.4
stress
perchlorate 75 mM
+0.0
N.D.
-0.0
-1.4
-0.9
stress
Nalidixic 0.01 mg/ml
+0.0
N.D.
-0.2
-0.9
-0.9
stress
nitrate 200 mM
+0.3
N.D.
+0.1
-1.1
-1.2
stress
Cisplatin 0.0032 mg/ml
-0.0
N.D.
-0.1
-0.8
-1.0
stress
Nalidixic 0.02 mg/ml
+0.0
N.D.
-0.2
-0.7
-0.4
stress
Ceftazidime 0.05 mg/ml
+0.0
N.D.
-0.2
-0.5
-0.5
stress
nitrate 150 mM
+0.2
N.D.
+0.2
-0.6
-0.9
stress
Sisomicin 0.016 mg/ml
-0.0
N.D.
-0.1
-0.4
-0.2
stress
Spectinomycin 0.04 mg/ml
+0.1
N.D.
-0.1
-0.5
-0.3
nitrogen source
nitrate (N)
-0.2
N.D.
-0.2
-0.2
-0.2
stress
Tetracycline 0.024 mg/ml
-0.0
N.D.
-0.4
+0.1
-0.4
lb
LB
-0.0
N.D.
+0.2
-0.4
-0.4
stress
Ceftazidime 0.1 mg/ml
-0.1
N.D.
-0.2
-0.2
-0.0
stress
Chloride 250 mM
+0.1
N.D.
-0.0
-0.2
-0.4
stress
Nalidixic 0.04 mg/ml
-0.0
N.D.
+0.1
-0.3
-0.3
stress
Thallium(I) acetate 0.008 mg/ml
+0.1
N.D.
+0.0
-0.4
-0.1
carbon source
D-Glucose (C)
-0.1
N.D.
+0.1
-0.1
-0.2
carbon source
pyruvate (C)
+0.0
N.D.
+0.1
-0.2
-0.3
stress
sodium fluoride 60 mM
+0.1
N.D.
+0.0
-0.3
-0.2
lb
LB
-0.1
N.D.
+0.0
+0.1
-0.2
carbon source
L-Alanine (C)
+0.1
N.D.
+0.1
-0.2
+0.1
stress
Chloramphenicol 0.008 mg/ml
+0.1
N.D.
-0.2
+0.1
+0.2
nitrogen source
Casamino Acids (N)
+0.1
N.D.
+0.0
-0.2
+0.2
stress
Thallium(I) acetate 0.016 mg/ml
-0.1
N.D.
+0.1
+0.3
-0.0
stress
Chlorite 0.32 mM
+0.3
N.D.
+0.3
-0.3
+0.0
nitrogen source
L-Asparagine (N)
+0.0
N.D.
-0.2
+0.4
+0.1
carbon source
D-Fructose (C)
+0.1
N.D.
+0.6
+0.0
-0.1
carbon source
D-Fructose (C)
-0.0
N.D.
+0.5
+0.1
+0.4
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