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Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS13445 and ABZR86_RS13450 are separated by 49 nucleotides
ABZR86_RS13450 and ABZR86_RS13455 overlap by 4 nucleotides
ABZR86_RS13455 and ABZR86_RS13460 are separated by 22 nucleotides
ABZR86_RS13460 and ABZR86_RS13465 are separated by 43 nucleotides
ABZR86_RS13445: ABZR86_RS13445 - tRNA (cytidine(34)-2'-O)-methyltransferase, at 3,014,874 to 3,015,338
_RS13445
ABZR86_RS13450: ABZR86_RS13450 - SCP2 sterol-binding domain-containing protein, at 3,015,388 to 3,016,038
_RS13450
ABZR86_RS13455: ABZR86_RS13455 - ubiquinone biosynthesis regulatory protein kinase UbiB, at 3,016,035 to 3,017,681
_RS13455
ABZR86_RS13460: ABZR86_RS13460 - pseudouridine synthase, at 3,017,704 to 3,018,414
_RS13460
ABZR86_RS13465: ABZR86_RS13465 - alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB, at 3,018,458 to 3,018,880
_RS13465
Group
Condition
ABZR86
_RS13445
ABZR86
_RS13450
ABZR86
_RS13455
ABZR86
_RS13460
ABZR86
_RS13465
stress
Tetracycline 0.024 mg/ml
-0.2
N.D.
N.D.
-0.0
-5.1
lb
LB
-0.9
N.D.
N.D.
-0.4
-2.5
stress
Tetracycline 0.012 mg/ml
-0.3
N.D.
N.D.
+0.0
-0.8
stress
A22 0.01 mg/ml
-0.5
N.D.
N.D.
+0.2
-0.7
nitrogen source
L-Asparagine (N)
-0.3
N.D.
N.D.
-0.0
-0.5
stress
Chloride 250 mM
-0.4
N.D.
N.D.
+0.0
-0.4
stress
Thallium(I) acetate 0.016 mg/ml
-0.3
N.D.
N.D.
+0.1
-0.5
nitrogen source
nitrate (N)
+0.2
N.D.
N.D.
+0.3
-1.1
lb
LB
-0.3
N.D.
N.D.
+0.2
-0.2
stress
Fusidic 0.4 mg/ml
+0.7
N.D.
N.D.
-0.1
-0.9
nitrogen source
L-Lysine (N)
+0.2
N.D.
N.D.
+0.2
-0.7
nitrogen source
N-Acetyl-D-glucosamine (N)
-0.6
N.D.
N.D.
+0.0
+0.3
nitrogen source
L-Proline (N)
-0.5
N.D.
N.D.
+0.2
-0.0
carbon source
a-Cyclodextrin (C)
+0.1
N.D.
N.D.
+0.2
-0.5
nitrogen source
L-Leucine (N)
+0.1
N.D.
N.D.
+0.3
-0.6
stress
Sisomicin 0.016 mg/ml
-0.0
N.D.
N.D.
-0.3
+0.3
nitrogen source
L-Isoleucine (N)
-0.2
N.D.
N.D.
+0.1
+0.5
carbon source
D-Galactose (C)
+0.1
N.D.
N.D.
-0.1
+0.5
stress
Zinc 2.5 mM
-0.2
N.D.
N.D.
+0.0
+0.6
stress
Fusidic 0.2 mg/ml
-0.1
N.D.
N.D.
-0.0
+0.7
lb
LB
+0.4
N.D.
N.D.
-0.2
+0.4
carbon source
D-Glucose (C)
+0.3
N.D.
N.D.
-0.0
+0.4
stress
Paraquat dichloride 0.05 mg/ml
+0.0
N.D.
N.D.
+0.1
+0.6
carbon source
D-Fructose (C)
+0.1
N.D.
N.D.
+0.1
+0.6
stress
Thallium(I) acetate 0.008 mg/ml
+0.2
N.D.
N.D.
-0.1
+0.8
carbon source
L-Alanine (C)
-0.0
N.D.
N.D.
+0.0
+1.0
carbon source
D-Cellobiose (C)
+0.4
N.D.
N.D.
-0.2
+0.9
carbon source
pyruvate (C)
+0.5
N.D.
N.D.
+0.1
+0.6
carbon source
D-Maltose (C)
+0.3
N.D.
N.D.
+0.0
+1.0
carbon source
D-Fructose (C)
+0.6
N.D.
N.D.
+0.0
+1.0
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