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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS13365 and ABZR86_RS13370 overlap by 4 nucleotides
ABZR86_RS13370 and ABZR86_RS13375 overlap by 14 nucleotides
ABZR86_RS13375 and ABZR86_RS13380 are separated by 21 nucleotides
ABZR86_RS13380 and ABZR86_RS13385 are separated by 66 nucleotides
ABZR86_RS13365: ABZR86_RS13365 - cupin domain-containing protein, at 2,999,364 to 2,999,816
_RS13365
ABZR86_RS13370: ABZR86_RS13370 - twin-arginine translocase subunit TatC, at 2,999,813 to 3,000,583
_RS13370
ABZR86_RS13375: ABZR86_RS13375 - Sec-independent protein translocase protein TatB, at 3,000,570 to 3,000,962
_RS13375
ABZR86_RS13380: ABZR86_RS13380 - Sec-independent protein translocase subunit TatA, at 3,000,984 to 3,001,220
_RS13380
ABZR86_RS13385: ABZR86_RS13385 - lipid-binding SYLF domain-containing protein, at 3,001,287 to 3,001,973
_RS13385
Group
Condition
ABZR86
_RS13365
ABZR86
_RS13370
ABZR86
_RS13375
ABZR86
_RS13380
ABZR86
_RS13385
lb
LB
+0.1
-0.3
N.D.
-5.6
-0.7
stress
Nalidixic 0.01 mg/ml
-0.0
-1.7
N.D.
-3.3
-1.0
stress
nitrate 200 mM
+0.1
-1.2
N.D.
-1.9
-3.0
stress
Fusidic 0.4 mg/ml
-0.0
-2.2
N.D.
-2.2
-1.3
stress
Fusidic 0.2 mg/ml
-0.1
-2.7
N.D.
-2.0
-0.9
stress
nitrate 150 mM
+0.1
-1.2
N.D.
-1.8
-2.1
carbon source
D-Cellobiose (C)
-0.2
-2.6
N.D.
-2.0
+0.1
carbon source
pyruvate (C)
-0.1
-0.7
N.D.
-3.7
-0.3
stress
A22 0.02 mg/ml
-0.1
-1.2
N.D.
-2.8
-0.2
carbon source
D-Fructose (C)
-0.1
-1.8
N.D.
-2.4
+0.2
stress
Nalidixic 0.02 mg/ml
+0.1
-1.5
N.D.
-1.4
-0.8
carbon source
D-Cellobiose (C)
-0.0
-1.7
N.D.
-1.7
-0.1
stress
Chloride 250 mM
+0.2
-1.2
N.D.
-1.2
-1.1
stress
perchlorate 75 mM
+0.1
-0.3
N.D.
+0.1
-3.1
carbon source
D-Glucose (C)
-0.1
-1.5
N.D.
-1.6
+0.1
carbon source
a-Cyclodextrin (C)
-0.1
-1.0
N.D.
-2.0
-0.0
carbon source
D-Fructose (C)
+0.1
-1.7
N.D.
-1.2
-0.2
carbon source
pyruvate (C)
+0.1
-1.0
N.D.
-1.8
-0.3
stress
Chlorite 0.32 mM
-0.1
-1.0
N.D.
-1.5
-0.3
stress
Cisplatin 0.0032 mg/ml
+0.2
-0.8
N.D.
-0.5
-1.3
carbon source
D-Maltose (C)
-0.1
-1.1
N.D.
-1.1
+0.1
stress
Ceftazidime 0.05 mg/ml
-0.1
-0.8
N.D.
-1.0
-0.4
stress
nitrite 6 mM
-0.0
-1.0
N.D.
-1.0
+0.0
lb
LB
+0.0
-0.6
N.D.
-1.2
-0.0
carbon source
L-Proline (C)
+0.1
-0.7
N.D.
-1.0
+0.2
nitrogen source
L-Asparagine (N)
+0.1
+0.5
N.D.
-1.5
-0.0
stress
Sisomicin 0.016 mg/ml
-0.0
+0.7
N.D.
+0.6
-0.6
stress
Paraquat dichloride 0.2 mg/ml
-0.1
+0.8
N.D.
+0.8
-0.2
stress
Spectinomycin 0.04 mg/ml
-0.0
+1.3
N.D.
+1.0
-0.3
nitrogen source
L-Proline (N)
-0.1
+2.0
N.D.
+2.0
+0.0
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