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Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS13040 and ABZR86_RS13045 are separated by 108 nucleotides
ABZR86_RS13045 and ABZR86_RS13050 are separated by 156 nucleotides
ABZR86_RS13050 and ABZR86_RS13055 are separated by 45 nucleotides
ABZR86_RS13055 and ABZR86_RS13060 are separated by 188 nucleotides
ABZR86_RS13040: ABZR86_RS13040 - porphobilinogen synthase, at 2,926,462 to 2,927,454
_RS13040
ABZR86_RS13045: ABZR86_RS13045 - sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC, at 2,927,563 to 2,928,657
_RS13045
ABZR86_RS13050: ABZR86_RS13050 - GH1 family beta-glucosidase, at 2,928,814 to 2,930,166
_RS13050
ABZR86_RS13055: ABZR86_RS13055 - glucokinase, at 2,930,212 to 2,931,231
_RS13055
ABZR86_RS13060: ABZR86_RS13060 - ATP-dependent helicase HrpB, at 2,931,420 to 2,933,930
_RS13060
Group
Condition
ABZR86
_RS13040
ABZR86
_RS13045
ABZR86
_RS13050
ABZR86
_RS13055
ABZR86
_RS13060
nitrogen source
L-Leucine (N)
N.D.
+0.3
+0.2
-4.2
+0.1
carbon source
a-Cyclodextrin (C)
N.D.
+0.7
+1.1
-6.0
+0.8
carbon source
D-Fructose (C)
N.D.
-0.0
+0.1
-3.1
+0.3
carbon source
D-Fructose (C)
N.D.
+0.1
+0.1
-3.2
+0.3
nitrogen source
Glucuronamide (N)
N.D.
+0.3
+0.3
-3.4
+0.3
carbon source
D-Maltose (C)
N.D.
+0.8
+1.3
-5.4
+0.9
carbon source
D-Cellobiose (C)
N.D.
+0.9
+1.7
-5.5
+1.0
carbon source
a-Cyclodextrin (C)
N.D.
+0.9
+1.2
-4.6
+0.8
carbon source
D-Maltose (C)
N.D.
+0.9
+1.3
-4.7
+0.8
nitrogen source
L-Isoleucine (N)
N.D.
-0.0
+0.3
-1.8
-0.0
carbon source
D-Cellobiose (C)
N.D.
+0.9
+1.6
-4.8
+0.9
nitrogen source
D-Glucosamine Hydrochloride (N)
N.D.
+0.1
+0.1
-1.2
-0.3
nitrogen source
nitrate (N)
N.D.
+0.1
+0.2
-1.8
+0.3
nitrogen source
L-Asparagine (N)
N.D.
-0.2
+0.0
-1.1
+0.2
stress
Sisomicin 0.016 mg/ml
N.D.
-0.0
-0.0
-0.7
-0.3
nitrogen source
L-Proline (N)
N.D.
-0.0
+0.2
-0.9
-0.2
nitrogen source
L-Arginine (N)
N.D.
+0.1
+0.2
-1.1
-0.1
carbon source
D-Glucose (C)
N.D.
+1.3
+2.0
-4.9
+1.0
lb
LB
N.D.
-0.1
+0.1
+0.1
-0.6
nitrogen source
N-Acetyl-D-glucosamine (N)
N.D.
-0.1
+0.0
-0.6
+0.1
nitrogen source
Casamino Acids (N)
N.D.
+0.1
+0.1
-0.9
+0.1
nitrogen source
L-Lysine (N)
N.D.
+0.5
+0.4
-1.4
+0.1
stress
Paraquat dichloride 0.1 mg/ml
N.D.
+0.2
+0.0
-0.4
-0.1
stress
perchlorate 75 mM
N.D.
-0.1
-0.0
+0.6
-0.1
carbon source
L-Alanine (C)
N.D.
+0.3
-0.0
-0.3
+0.4
carbon source
D-Glucose (C)
N.D.
+1.3
+2.0
-4.0
+1.1
stress
Nalidixic 0.02 mg/ml
N.D.
-0.0
+0.0
+0.4
+0.2
stress
Nalidixic 0.04 mg/ml
N.D.
+0.1
+0.1
+0.5
+0.1
stress
Chlorite 0.32 mM
N.D.
+0.1
-0.0
+1.1
-0.0
carbon source
D-Galactose (C)
N.D.
-0.1
-0.1
+1.4
+0.2
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