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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS12965 and ABZR86_RS12970 are separated by 10 nucleotides
ABZR86_RS12970 and ABZR86_RS12975 are separated by 68 nucleotides
ABZR86_RS12975 and ABZR86_RS12980 are separated by 5 nucleotides
ABZR86_RS12980 and ABZR86_RS12985 are separated by 259 nucleotides
ABZR86_RS12965: ABZR86_RS12965 - parallel beta-helix domain-containing protein, at 2,907,249 to 2,908,475
_RS12965
ABZR86_RS12970: ABZR86_RS12970 - SO2930 family diheme c-type cytochrome, at 2,908,486 to 2,909,634
_RS12970
ABZR86_RS12975: ABZR86_RS12975 - TonB-dependent receptor, at 2,909,703 to 2,912,150
_RS12975
ABZR86_RS12980: ABZR86_RS12980 - coniferyl aldehyde dehydrogenase, at 2,912,156 to 2,913,568
_RS12980
ABZR86_RS12985: ABZR86_RS12985 - outer membrane protein transport protein, at 2,913,828 to 2,915,267
_RS12985
Group
Condition
ABZR86
_RS12965
ABZR86
_RS12970
ABZR86
_RS12975
ABZR86
_RS12980
ABZR86
_RS12985
stress
Fusidic 0.4 mg/ml
-0.2
-0.1
+0.0
-0.1
-0.4
stress
Paraquat dichloride 0.2 mg/ml
-0.3
-0.2
-0.1
-0.1
-0.0
stress
nitrate 200 mM
+0.0
-0.1
-0.0
-0.2
-0.3
stress
Carbenicillin 0.04 mg/ml
+0.0
-0.1
+0.0
-0.1
-0.2
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.2
-0.1
+0.0
-0.1
-0.0
stress
Thallium(I) acetate 0.008 mg/ml
-0.1
-0.1
+0.0
+0.0
-0.3
stress
Chlorite 0.32 mM
-0.1
+0.0
+0.0
-0.1
-0.3
carbon source
D-Galactose (C)
+0.2
+0.0
-0.1
-0.0
-0.3
nitrogen source
L-Arginine (N)
-0.1
-0.2
+0.0
+0.0
+0.1
stress
Chloramphenicol 0.012 mg/ml
-0.1
-0.1
+0.1
-0.1
+0.1
nitrogen source
L-Leucine (N)
-0.0
-0.1
-0.1
-0.2
+0.3
stress
Tetracycline 0.012 mg/ml
+0.1
-0.1
-0.0
-0.2
+0.3
stress
Sisomicin 0.016 mg/ml
-0.1
-0.0
+0.1
-0.2
+0.2
carbon source
L-Alanine (C)
+0.0
-0.1
-0.1
-0.2
+0.4
stress
Zinc 2.5 mM
-0.1
-0.0
-0.0
-0.1
+0.5
carbon source
NAG (C)
+0.2
-0.0
+0.1
-0.1
+0.1
carbon source
D-Cellobiose (C)
+0.2
+0.0
-0.0
-0.0
+0.2
carbon source
D-Glucose (C)
+0.0
-0.1
+0.0
+0.0
+0.3
nitrogen source
L-Asparagine (N)
+0.0
+0.1
+0.3
+0.0
+0.1
carbon source
a-Cyclodextrin (C)
-0.0
+0.0
+0.1
+0.2
+0.2
carbon source
D-Maltose (C)
+0.0
+0.2
+0.0
+0.1
+0.2
carbon source
pyruvate (C)
+0.2
-0.0
+0.1
-0.0
+0.3
carbon source
L-Alanine (C)
+0.1
+0.2
-0.1
+0.1
+0.4
carbon source
D-Maltose (C)
+0.3
-0.1
+0.1
+0.1
+0.2
carbon source
a-Cyclodextrin (C)
+0.1
+0.0
+0.1
+0.1
+0.4
carbon source
pyruvate (C)
+0.1
+0.0
+0.1
+0.0
+0.4
carbon source
L-Proline (C)
+0.1
+0.2
+0.1
+0.1
+0.2
carbon source
D-Fructose (C)
+0.2
+0.2
+0.0
+0.1
+0.2
carbon source
D-Glucose (C)
+0.1
+0.2
+0.1
+0.1
+0.5
stress
Tetracycline 0.024 mg/ml
+0.2
+0.1
-0.0
-0.2
+1.0
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