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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS12530 and ABZR86_RS12535 are separated by 517 nucleotides
ABZR86_RS12535 and ABZR86_RS12540 are separated by 317 nucleotides
ABZR86_RS12540 and ABZR86_RS12545 are separated by 47 nucleotides
ABZR86_RS12545 and ABZR86_RS12550 are separated by 118 nucleotides
ABZR86_RS12530: ABZR86_RS12530 - DUF3667 domain-containing protein, at 2,803,448 to 2,804,692
_RS12530
ABZR86_RS12535: ABZR86_RS12535 - primosomal protein N', at 2,805,210 to 2,807,393
_RS12535
ABZR86_RS12540: ABZR86_RS12540 - NAD(P)/FAD-dependent oxidoreductase, at 2,807,711 to 2,808,982
_RS12540
ABZR86_RS12545: ABZR86_RS12545 - transaldolase, at 2,809,030 to 2,809,998
_RS12545
ABZR86_RS12550: ABZR86_RS12550 - efflux transporter outer membrane subunit, at 2,810,117 to 2,811,562
_RS12550
Group
Condition
ABZR86
_RS12530
ABZR86
_RS12535
ABZR86
_RS12540
ABZR86
_RS12545
ABZR86
_RS12550
carbon source
D-Glucose (C)
+0.0
N.D.
-0.1
-2.2
-0.2
carbon source
D-Cellobiose (C)
-0.0
N.D.
+0.0
-1.7
-0.1
carbon source
D-Glucose (C)
-0.1
N.D.
+0.0
-1.6
-0.0
carbon source
D-Cellobiose (C)
+0.0
N.D.
-0.0
-1.7
-0.0
carbon source
D-Maltose (C)
-0.0
N.D.
+0.0
-1.2
-0.0
carbon source
D-Maltose (C)
-0.1
N.D.
+0.0
-0.9
-0.0
carbon source
D-Galactose (C)
+0.2
N.D.
+0.0
-1.3
+0.2
carbon source
a-Cyclodextrin (C)
-0.0
N.D.
+0.0
-0.8
-0.1
stress
Chlorite 0.32 mM
-0.1
N.D.
-0.1
-0.6
+0.1
carbon source
a-Cyclodextrin (C)
+0.1
N.D.
+0.0
-0.7
-0.0
stress
Thallium(I) acetate 0.016 mg/ml
-0.0
N.D.
-0.3
-0.2
-0.2
nitrogen source
L-Lysine (N)
-0.2
N.D.
-0.1
-0.1
-0.1
carbon source
pyruvate (C)
-0.2
N.D.
-0.2
-0.1
+0.1
stress
Nalidixic 0.08 mg/ml
-0.1
N.D.
-0.1
-0.2
+0.0
stress
Thallium(I) acetate 0.008 mg/ml
+0.1
N.D.
-0.2
-0.2
-0.1
stress
Tetracycline 0.024 mg/ml
-0.2
N.D.
-0.2
-0.1
+0.1
stress
Chloramphenicol 0.012 mg/ml
-0.0
N.D.
-0.1
-0.2
+0.1
nitrogen source
N-Acetyl-D-glucosamine (N)
-0.0
N.D.
-0.2
+0.2
-0.1
stress
A22 0.02 mg/ml
+0.1
N.D.
-0.4
+0.0
+0.1
nitrogen source
L-Asparagine (N)
+0.1
N.D.
-0.2
-0.1
+0.1
nitrogen source
Glucuronamide (N)
+0.0
N.D.
+0.1
-0.3
+0.1
carbon source
D-Fructose (C)
+0.1
N.D.
-0.2
+0.2
-0.1
stress
D-Cycloserine 0.032 mg/ml
+0.1
N.D.
+0.2
-0.3
+0.1
nitrogen source
L-Isoleucine (N)
-0.3
N.D.
-0.0
+0.4
-0.0
stress
Fusidic 0.2 mg/ml
-0.3
N.D.
+0.1
+0.4
-0.1
carbon source
L-Alanine (C)
+0.1
N.D.
-0.3
+0.2
+0.2
stress
A22 0.01 mg/ml
+0.3
N.D.
+0.1
-0.1
+0.0
stress
Chloramphenicol 0.008 mg/ml
-0.0
N.D.
+0.3
+0.1
-0.0
lb
LB
-0.1
N.D.
+0.1
+0.2
+0.2
stress
Dimethyl Sulfoxide 7.5 vol%
+0.1
N.D.
+0.2
+0.2
+0.0
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