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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS11930 and ABZR86_RS11935 overlap by 1 nucleotides
ABZR86_RS11935 and ABZR86_RS11940 are separated by 106 nucleotides
ABZR86_RS11940 and ABZR86_RS11945 are separated by 80 nucleotides
ABZR86_RS11945 and ABZR86_RS11950 are separated by 127 nucleotides
ABZR86_RS11930: ABZR86_RS11930 - MFS transporter, at 2,673,908 to 2,675,212
_RS11930
ABZR86_RS11935: ABZR86_RS11935 - D-lactate dehydrogenase, at 2,675,212 to 2,676,924
_RS11935
ABZR86_RS11940: ABZR86_RS11940 - Xaa-Pro dipeptidase, at 2,677,031 to 2,678,353
_RS11940
ABZR86_RS11945: ABZR86_RS11945 - hypothetical protein, at 2,678,434 to 2,678,823
_RS11945
ABZR86_RS11950: ABZR86_RS11950 - cytochrome oxidase putative small subunit CydP, at 2,678,951 to 2,679,187
_RS11950
Group
Condition
ABZR86
_RS11930
ABZR86
_RS11935
ABZR86
_RS11940
ABZR86
_RS11945
ABZR86
_RS11950
stress
A22 0.02 mg/ml
-0.2
-0.0
-0.8
N.D.
N.D.
lb
LB
-0.2
-0.2
-0.3
N.D.
N.D.
stress
Tetracycline 0.024 mg/ml
-0.2
-0.1
-0.5
N.D.
N.D.
stress
Fusidic 0.2 mg/ml
-0.1
+0.1
-0.6
N.D.
N.D.
stress
Thallium(I) acetate 0.008 mg/ml
-0.1
+0.0
-0.4
N.D.
N.D.
stress
A22 0.01 mg/ml
+0.0
+0.0
-0.5
N.D.
N.D.
stress
Paraquat dichloride 0.05 mg/ml
-0.2
-0.1
-0.1
N.D.
N.D.
stress
sodium fluoride 40 mM
-0.0
+0.1
-0.4
N.D.
N.D.
stress
Nalidixic 0.08 mg/ml
-0.2
+0.2
-0.4
N.D.
N.D.
carbon source
D-Glucose (C)
+0.1
-0.1
-0.3
N.D.
N.D.
stress
Chloramphenicol 0.012 mg/ml
+0.2
+0.1
-0.6
N.D.
N.D.
stress
Nalidixic 0.02 mg/ml
-0.2
+0.1
-0.2
N.D.
N.D.
stress
Chloramphenicol 0.008 mg/ml
+0.3
+0.0
-0.4
N.D.
N.D.
carbon source
D-Fructose (C)
+0.2
-0.3
-0.0
N.D.
N.D.
carbon source
D-Cellobiose (C)
-0.3
+0.1
+0.1
N.D.
N.D.
stress
nitrate 200 mM
-0.0
-0.2
+0.2
N.D.
N.D.
stress
perchlorate 75 mM
-0.1
-0.2
+0.4
N.D.
N.D.
carbon source
pyruvate (C)
+0.2
-0.2
+0.1
N.D.
N.D.
stress
Paraquat dichloride 0.2 mg/ml
-0.2
-0.2
+0.4
N.D.
N.D.
stress
Fusidic 0.4 mg/ml
+0.1
+0.2
-0.2
N.D.
N.D.
lb
LB
+0.2
-0.2
+0.1
N.D.
N.D.
nitrogen source
nitrate (N)
-0.1
-0.1
+0.3
N.D.
N.D.
nitrogen source
N-Acetyl-D-glucosamine (N)
+0.0
-0.1
+0.3
N.D.
N.D.
stress
Cisplatin 0.0032 mg/ml
-0.0
+0.2
+0.2
N.D.
N.D.
carbon source
D-Galactose (C)
+0.3
+0.1
-0.0
N.D.
N.D.
stress
Zinc 2.5 mM
-0.0
+0.1
+0.4
N.D.
N.D.
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.1
-0.1
+0.7
N.D.
N.D.
nitrogen source
Glucuronamide (N)
+0.0
+0.2
+0.5
N.D.
N.D.
stress
Chlorite 0.32 mM
+0.3
+0.1
+0.5
N.D.
N.D.
stress
Sisomicin 0.016 mg/ml
-0.0
-0.0
+1.6
N.D.
N.D.
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