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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS11660 and ABZR86_RS11665 are separated by 78 nucleotides
ABZR86_RS11665 and ABZR86_RS11670 are separated by 107 nucleotides
ABZR86_RS11670 and ABZR86_RS11675 are separated by 145 nucleotides
ABZR86_RS11675 and ABZR86_RS11680 are separated by 227 nucleotides
ABZR86_RS11660: ABZR86_RS11660 - Rieske 2Fe-2S domain-containing protein, at 2,610,927 to 2,611,268
_RS11660
ABZR86_RS11665: ABZR86_RS11665 - hypothetical protein, at 2,611,347 to 2,611,631
_RS11665
ABZR86_RS11670: ABZR86_RS11670 - methylated-DNA--[protein]-cysteine S-methyltransferase, at 2,611,739 to 2,612,596
_RS11670
ABZR86_RS11675: ABZR86_RS11675 - drug/metabolite exporter YedA, at 2,612,742 to 2,613,662
_RS11675
ABZR86_RS11680: ABZR86_RS11680 - TIGR00366 family protein, at 2,613,890 to 2,615,305
_RS11680
Group
Condition
ABZR86
_RS11660
ABZR86
_RS11665
ABZR86
_RS11670
ABZR86
_RS11675
ABZR86
_RS11680
stress
Paraquat dichloride 0.2 mg/ml
-0.0
-0.4
+0.0
-0.1
-0.3
stress
A22 0.01 mg/ml
-0.2
-0.4
+0.0
+0.0
-0.2
stress
sodium fluoride 40 mM
-0.2
-0.0
-0.2
-0.1
-0.0
stress
Spectinomycin 0.04 mg/ml
+0.0
-0.4
-0.1
-0.1
+0.0
stress
Thallium(I) acetate 0.008 mg/ml
+0.3
-0.7
-0.0
-0.1
+0.0
stress
Fusidic 0.4 mg/ml
+0.3
-0.5
-0.0
+0.0
-0.1
carbon source
L-Proline (C)
+0.0
-0.5
+0.1
-0.0
+0.1
nitrogen source
L-Lysine (N)
+0.2
-0.1
-0.3
-0.1
+0.1
stress
Zinc 2.5 mM
-0.1
+0.1
-0.2
-0.2
+0.1
stress
Fusidic 0.2 mg/ml
-0.2
+0.2
-0.0
-0.1
-0.1
carbon source
D-Cellobiose (C)
-0.0
-0.2
+0.1
-0.2
+0.1
stress
Tetracycline 0.024 mg/ml
+0.1
-0.3
-0.0
-0.2
+0.2
carbon source
D-Galactose (C)
-0.2
-0.2
+0.2
+0.2
-0.1
nitrogen source
L-Arginine (N)
-0.2
+0.0
+0.3
-0.1
-0.1
lb
LB
+0.0
-0.4
+0.2
+0.0
+0.1
carbon source
a-Cyclodextrin (C)
+0.2
-0.2
+0.1
-0.1
-0.0
carbon source
a-Cyclodextrin (C)
-0.1
+0.3
-0.2
+0.1
-0.0
stress
Chloramphenicol 0.012 mg/ml
-0.0
-0.2
+0.2
-0.1
+0.1
nitrogen source
L-Proline (N)
-0.0
+0.4
-0.1
-0.0
-0.2
carbon source
L-Alanine (C)
-0.5
+0.2
+0.2
+0.1
+0.0
stress
Nalidixic 0.01 mg/ml
+0.1
+0.3
-0.2
-0.0
-0.0
carbon source
NAG (C)
-0.1
-0.2
+0.1
+0.1
+0.1
stress
Chloride 250 mM
-0.2
+0.3
+0.1
-0.0
+0.0
stress
Sisomicin 0.016 mg/ml
+0.3
-0.2
-0.1
+0.1
-0.0
carbon source
D-Fructose (C)
-0.1
+0.1
+0.2
+0.3
-0.0
carbon source
D-Cellobiose (C)
+0.3
+0.1
+0.1
+0.2
-0.2
carbon source
pyruvate (C)
+0.2
+0.4
-0.2
+0.2
-0.0
carbon source
D-Glucose (C)
+0.1
+0.1
+0.2
-0.0
+0.2
nitrogen source
L-Asparagine (N)
-0.3
+0.5
+0.6
+0.0
+0.2
stress
Chlorite 0.32 mM
-1.0
+1.7
+1.0
+0.1
-0.1
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