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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS11520 and ABZR86_RS11525 are separated by 32 nucleotides
ABZR86_RS11525 and ABZR86_RS11530 are separated by 84 nucleotides
ABZR86_RS11530 and ABZR86_RS11535 are separated by 160 nucleotides
ABZR86_RS11535 and ABZR86_RS11540 are separated by 407 nucleotides
ABZR86_RS11520: ABZR86_RS11520 - TonB-dependent siderophore receptor, at 2,570,691 to 2,572,907
_RS11520
ABZR86_RS11525: ABZR86_RS11525 - tRNA dihydrouridine synthase DusB, at 2,572,940 to 2,573,926
_RS11525
ABZR86_RS11530: ABZR86_RS11530 - SGNH/GDSL hydrolase family protein, at 2,574,011 to 2,574,619
_RS11530
ABZR86_RS11535: ABZR86_RS11535 - protease pro-enzyme activation domain-containing protein, at 2,574,780 to 2,576,657
_RS11535
ABZR86_RS11540: ABZR86_RS11540 - methionine adenosyltransferase, at 2,577,065 to 2,578,264
_RS11540
Group
Condition
ABZR86
_RS11520
ABZR86
_RS11525
ABZR86
_RS11530
ABZR86
_RS11535
ABZR86
_RS11540
stress
Spectinomycin 0.04 mg/ml
-0.1
-0.2
-0.0
-0.2
N.D.
stress
Tetracycline 0.024 mg/ml
-0.2
-0.2
+0.1
-0.2
N.D.
carbon source
D-Cellobiose (C)
-0.2
-0.1
-0.0
-0.2
N.D.
nitrogen source
L-Proline (N)
+0.0
-0.2
-0.1
-0.1
N.D.
stress
D-Cycloserine 0.032 mg/ml
-0.0
-0.2
+0.0
-0.1
N.D.
stress
Carbenicillin 0.02 mg/ml
-0.0
-0.2
+0.0
-0.1
N.D.
stress
Fusidic 0.2 mg/ml
+0.0
-0.2
-0.1
-0.0
N.D.
stress
Fusidic 0.4 mg/ml
-0.1
-0.2
+0.1
-0.0
N.D.
stress
Thallium(I) acetate 0.008 mg/ml
+0.1
-0.2
-0.1
-0.2
N.D.
lb
LB
-0.0
-0.3
+0.2
-0.2
N.D.
stress
Chlorite 0.32 mM
-0.1
-0.3
+0.1
+0.0
N.D.
stress
Zinc 2.5 mM
-0.0
-0.2
+0.1
-0.1
N.D.
stress
sodium fluoride 60 mM
+0.0
-0.2
+0.0
-0.1
N.D.
carbon source
a-Cyclodextrin (C)
-0.1
+0.1
-0.1
-0.1
N.D.
stress
Paraquat dichloride 0.2 mg/ml
-0.0
-0.2
+0.1
-0.0
N.D.
stress
Thallium(I) acetate 0.016 mg/ml
+0.2
-0.1
-0.0
+0.0
N.D.
nitrogen source
Glucuronamide (N)
+0.1
-0.1
+0.1
-0.1
N.D.
stress
Chloramphenicol 0.008 mg/ml
+0.0
+0.2
+0.0
-0.1
N.D.
stress
Nalidixic 0.04 mg/ml
+0.2
-0.1
+0.1
+0.0
N.D.
stress
Nalidixic 0.08 mg/ml
+0.1
+0.1
-0.1
+0.2
N.D.
carbon source
D-Maltose (C)
+0.1
+0.2
+0.0
-0.1
N.D.
lb
LB
+0.1
+0.1
+0.1
-0.1
N.D.
lb
LB
-0.0
+0.1
+0.3
-0.1
N.D.
carbon source
D-Glucose (C)
-0.0
+0.1
+0.2
+0.0
N.D.
stress
Chloramphenicol 0.012 mg/ml
+0.2
-0.1
+0.2
-0.0
N.D.
nitrogen source
L-Isoleucine (N)
+0.1
-0.0
+0.2
+0.1
N.D.
nitrogen source
L-Arginine (N)
+0.1
-0.0
+0.2
+0.0
N.D.
nitrogen source
L-Asparagine (N)
+0.0
-0.2
+0.7
+0.1
N.D.
carbon source
D-Fructose (C)
+0.2
+0.3
+0.2
-0.0
N.D.
carbon source
a-Cyclodextrin (C)
+0.1
+0.4
+0.3
+0.0
N.D.
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