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Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS11405 and ABZR86_RS11410 overlap by 4 nucleotides
ABZR86_RS11410 and ABZR86_RS11415 are separated by 18 nucleotides
ABZR86_RS11415 and ABZR86_RS11420 are separated by 25 nucleotides
ABZR86_RS11420 and ABZR86_RS11425 are separated by 227 nucleotides
ABZR86_RS11405: ABZR86_RS11405 - TrbG/VirB9 family P-type conjugative transfer protein, at 2,546,501 to 2,547,229
_RS11405
ABZR86_RS11410: ABZR86_RS11410 - TrbI/VirB10 family protein, at 2,547,226 to 2,548,470
_RS11410
ABZR86_RS11415: ABZR86_RS11415 - P-type DNA transfer ATPase VirB11, at 2,548,489 to 2,549,523
_RS11415
ABZR86_RS11420: ABZR86_RS11420 - lytic transglycosylase domain-containing protein, at 2,549,549 to 2,550,586
_RS11420
ABZR86_RS11425: ABZR86_RS11425 - TrbC/VirB2 family protein, at 2,550,814 to 2,551,155
_RS11425
Group
Condition
ABZR86
_RS11405
ABZR86
_RS11410
ABZR86
_RS11415
ABZR86
_RS11420
ABZR86
_RS11425
stress
Sisomicin 0.016 mg/ml
-0.4
-0.1
-0.1
+0.0
N.D.
carbon source
D-Fructose (C)
+0.3
-0.4
+0.0
-0.5
N.D.
lb
LB
+0.1
-0.8
+0.3
-0.1
N.D.
stress
sodium fluoride 40 mM
+0.1
-0.4
-0.2
+0.1
N.D.
stress
A22 0.01 mg/ml
-0.3
-0.1
+0.1
-0.0
N.D.
stress
Chlorite 0.32 mM
-0.0
-0.3
+0.2
-0.2
N.D.
stress
Thallium(I) acetate 0.016 mg/ml
-0.1
+0.2
-0.4
+0.1
N.D.
stress
Spectinomycin 0.04 mg/ml
+0.0
-0.5
+0.1
+0.1
N.D.
nitrogen source
L-Isoleucine (N)
-0.1
-0.3
+0.3
-0.1
N.D.
stress
Cisplatin 0.0032 mg/ml
-0.0
+0.2
-0.2
-0.2
N.D.
stress
Thallium(I) acetate 0.008 mg/ml
-0.1
+0.2
-0.2
+0.1
N.D.
carbon source
D-Glucose (C)
+0.2
+0.2
-0.3
-0.1
N.D.
stress
Paraquat dichloride 0.05 mg/ml
-0.3
+0.1
+0.3
+0.0
N.D.
lb
LB
-0.2
+0.1
+0.3
-0.1
N.D.
stress
Chloramphenicol 0.008 mg/ml
+0.1
-0.2
+0.4
-0.1
N.D.
nitrogen source
L-Asparagine (N)
+0.2
-0.2
+0.4
-0.0
N.D.
carbon source
pyruvate (C)
+0.2
+0.2
+0.0
-0.2
N.D.
carbon source
L-Proline (C)
+0.2
+0.2
+0.0
-0.1
N.D.
carbon source
pyruvate (C)
+0.3
+0.2
-0.2
+0.1
N.D.
stress
Fusidic 0.4 mg/ml
+0.3
+0.3
-0.0
-0.1
N.D.
carbon source
D-Maltose (C)
+0.4
-0.1
+0.1
+0.0
N.D.
stress
nitrite 6 mM
-0.0
+0.2
+0.1
+0.2
N.D.
nitrogen source
L-Proline (N)
+0.1
+0.1
+0.2
+0.1
N.D.
stress
Carbenicillin 0.02 mg/ml
-0.2
+0.4
+0.3
+0.1
N.D.
nitrogen source
N-Acetyl-D-glucosamine (N)
-0.0
+0.2
+0.1
+0.3
N.D.
carbon source
L-Proline (C)
+0.1
+0.2
+0.2
+0.2
N.D.
nitrogen source
L-Arginine (N)
+0.1
+0.1
+0.4
+0.0
N.D.
carbon source
L-Alanine (C)
+0.3
+0.1
+0.2
+0.1
N.D.
carbon source
D-Fructose (C)
+0.4
+0.1
+0.2
+0.1
N.D.
stress
Ceftazidime 0.05 mg/ml
+0.1
+0.3
+0.3
+0.1
N.D.
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