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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS10985 and ABZR86_RS10990 are separated by 327 nucleotides
ABZR86_RS10990 and ABZR86_RS10995 are separated by 56 nucleotides
ABZR86_RS10995 and ABZR86_RS11000 are separated by 6 nucleotides
ABZR86_RS11000 and ABZR86_RS11005 overlap by 4 nucleotides
ABZR86_RS10985: ABZR86_RS10985 - LysE/ArgO family amino acid transporter, at 2,440,444 to 2,441,061
_RS10985
ABZR86_RS10990: ABZR86_RS10990 - LysR family transcriptional regulator ArgP, at 2,441,389 to 2,442,291
_RS10990
ABZR86_RS10995: ABZR86_RS10995 - hypothetical protein, at 2,442,348 to 2,442,596
_RS10995
ABZR86_RS11000: ABZR86_RS11000 - spore coat U domain-containing protein, at 2,442,603 to 2,443,556
_RS11000
ABZR86_RS11005: ABZR86_RS11005 - fimbria/pilus outer membrane usher protein, at 2,443,553 to 2,445,919
_RS11005
Group
Condition
ABZR86
_RS10985
ABZR86
_RS10990
ABZR86
_RS10995
ABZR86
_RS11000
ABZR86
_RS11005
stress
sodium fluoride 60 mM
-0.2
-0.2
-0.3
+0.0
-0.0
stress
Nalidixic 0.08 mg/ml
-0.0
-0.2
-0.1
-0.1
-0.1
nitrogen source
nitrate (N)
-0.0
-0.3
-0.1
-0.1
+0.0
stress
Paraquat dichloride 0.2 mg/ml
+0.1
-0.3
-0.2
-0.0
+0.0
stress
A22 0.01 mg/ml
+0.1
-0.1
-0.2
-0.1
-0.0
stress
Ceftazidime 0.1 mg/ml
-0.1
+0.1
-0.4
+0.0
-0.0
lb
LB
-0.1
-0.2
+0.2
-0.1
-0.1
carbon source
NAG (C)
+0.1
-0.0
-0.3
-0.0
-0.1
stress
nitrite 6 mM
-0.1
-0.3
+0.1
-0.0
+0.1
nitrogen source
L-Lysine (N)
+0.0
-0.4
+0.4
-0.1
-0.0
carbon source
L-Alanine (C)
+0.2
-0.1
-0.2
-0.1
+0.1
carbon source
D-Fructose (C)
-0.5
+0.1
+0.3
-0.1
+0.2
stress
Paraquat dichloride 0.1 mg/ml
-0.2
-0.1
+0.2
+0.0
+0.1
stress
D-Cycloserine 0.032 mg/ml
-0.1
-0.1
+0.2
+0.1
-0.0
stress
nitrate 200 mM
-0.1
-0.1
+0.3
+0.1
-0.0
carbon source
L-Alanine (C)
+0.2
-0.4
+0.1
+0.1
+0.1
lb
LB
+0.1
-0.1
+0.3
+0.0
+0.0
nitrogen source
L-Leucine (N)
+0.1
-0.1
+0.3
-0.1
+0.1
stress
A22 0.02 mg/ml
-0.1
+0.1
+0.2
+0.1
-0.0
nitrogen source
L-Asparagine (N)
+0.4
+0.2
+0.3
-0.6
+0.0
stress
Paraquat dichloride 0.05 mg/ml
-0.1
+0.1
+0.3
-0.1
+0.1
stress
Carbenicillin 0.04 mg/ml
+0.1
-0.1
+0.4
-0.1
+0.1
carbon source
D-Glucose (C)
+0.1
+0.0
+0.4
-0.1
-0.0
stress
Fusidic 0.4 mg/ml
+0.2
-0.2
+0.1
+0.1
+0.2
carbon source
D-Maltose (C)
-0.1
+0.3
+0.3
-0.1
-0.1
stress
Ceftazidime 0.05 mg/ml
+0.1
-0.1
+0.2
+0.2
+0.1
stress
Spectinomycin 0.04 mg/ml
+0.3
+0.2
-0.4
+0.3
+0.2
stress
Tetracycline 0.012 mg/ml
+0.1
+0.2
+0.2
+0.2
+0.1
stress
Chloramphenicol 0.012 mg/ml
+0.2
+0.1
+0.2
+0.1
+0.3
stress
Tetracycline 0.024 mg/ml
+0.6
-0.1
+0.4
+0.3
+0.2
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