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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS10570 and ABZR86_RS10575 are separated by 94 nucleotides
ABZR86_RS10575 and ABZR86_RS10580 are separated by 7 nucleotides
ABZR86_RS10580 and ABZR86_RS10585 are separated by 21 nucleotides
ABZR86_RS10585 and ABZR86_RS10590 are separated by 10 nucleotides
ABZR86_RS10570: ABZR86_RS10570 - DUF3857 domain-containing protein, at 2,350,271 to 2,352,151
_RS10570
ABZR86_RS10575: ABZR86_RS10575 - FtsX-like permease family protein, at 2,352,246 to 2,353,460
_RS10575
ABZR86_RS10580: ABZR86_RS10580 - ABC transporter permease, at 2,353,468 to 2,354,784
_RS10580
ABZR86_RS10585: ABZR86_RS10585 - FtsX-like permease family protein, at 2,354,806 to 2,356,029
_RS10585
ABZR86_RS10590: ABZR86_RS10590 - ABC transporter permease, at 2,356,040 to 2,357,347
_RS10590
Group
Condition
ABZR86
_RS10570
ABZR86
_RS10575
ABZR86
_RS10580
ABZR86
_RS10585
ABZR86
_RS10590
stress
Paraquat dichloride 0.1 mg/ml
+0.0
-0.0
-0.2
-0.3
-0.1
stress
Chloride 250 mM
+0.1
-0.2
-0.1
-0.1
-0.3
stress
Nalidixic 0.08 mg/ml
-0.1
+0.1
-0.1
-0.4
-0.0
stress
Sisomicin 0.016 mg/ml
+0.1
+0.2
-0.2
-0.3
-0.2
stress
Nalidixic 0.04 mg/ml
-0.0
+0.1
-0.3
-0.2
+0.0
stress
Chlorite 0.32 mM
-0.1
+0.0
+0.1
-0.4
-0.0
nitrogen source
L-Lysine (N)
-0.0
-0.1
-0.1
-0.3
+0.2
carbon source
D-Fructose (C)
+0.1
-0.4
-0.1
+0.2
-0.2
stress
Thallium(I) acetate 0.016 mg/ml
+0.0
-0.1
+0.0
-0.4
+0.2
stress
Tetracycline 0.024 mg/ml
+0.0
+0.2
-0.1
-0.2
-0.2
carbon source
D-Cellobiose (C)
+0.0
+0.1
+0.0
-0.4
+0.0
carbon source
a-Cyclodextrin (C)
+0.0
-0.2
+0.1
-0.4
+0.2
stress
D-Cycloserine 0.032 mg/ml
-0.0
-0.1
-0.1
-0.1
+0.2
stress
Dimethyl Sulfoxide 7.5 vol%
-0.0
-0.1
+0.1
-0.3
+0.1
stress
Chloramphenicol 0.012 mg/ml
-0.0
+0.3
-0.2
-0.3
+0.1
stress
Paraquat dichloride 0.05 mg/ml
+0.0
-0.0
+0.1
-0.3
+0.2
carbon source
pyruvate (C)
+0.0
+0.1
+0.0
-0.3
+0.2
stress
Chloramphenicol 0.008 mg/ml
+0.0
+0.1
-0.0
-0.3
+0.3
stress
Carbenicillin 0.02 mg/ml
+0.0
+0.1
+0.2
-0.4
+0.2
carbon source
D-Maltose (C)
+0.0
-0.1
+0.3
-0.4
+0.2
carbon source
pyruvate (C)
+0.1
+0.2
-0.1
-0.2
+0.1
nitrogen source
L-Proline (N)
-0.0
-0.1
-0.1
-0.0
+0.4
carbon source
D-Fructose (C)
+0.0
+0.3
-0.1
-0.2
+0.1
lb
LB
+0.0
-0.0
+0.1
-0.2
+0.3
stress
Fusidic 0.4 mg/ml
-0.0
+0.1
+0.2
-0.2
+0.1
stress
A22 0.01 mg/ml
+0.0
-0.1
+0.2
-0.1
+0.3
stress
Zinc 2.5 mM
-0.0
+0.1
+0.1
-0.2
+0.4
nitrogen source
L-Asparagine (N)
+0.1
+0.0
+0.5
-0.4
+0.2
carbon source
L-Alanine (C)
+0.1
+0.1
+0.1
-0.1
+0.1
carbon source
D-Maltose (C)
-0.0
-0.1
+0.1
+0.1
+0.3
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