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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS10440 and ABZR86_RS10445 are separated by 36 nucleotides
ABZR86_RS10445 and ABZR86_RS10450 are separated by 39 nucleotides
ABZR86_RS10450 and ABZR86_RS10455 are separated by 36 nucleotides
ABZR86_RS10455 and ABZR86_RS10460 are separated by 370 nucleotides
ABZR86_RS10440: ABZR86_RS10440 - secondary thiamine-phosphate synthase enzyme YjbQ, at 2,324,630 to 2,325,070
_RS10440
ABZR86_RS10445: ABZR86_RS10445 - pyridoxamine 5'-phosphate oxidase, at 2,325,107 to 2,325,694
_RS10445
ABZR86_RS10450: ABZR86_RS10450 - kinase, at 2,325,734 to 2,326,564
_RS10450
ABZR86_RS10455: ABZR86_RS10455 - heavy metal-binding domain-containing protein, at 2,326,601 to 2,326,921
_RS10455
ABZR86_RS10460: ABZR86_RS10460 - hypothetical protein, at 2,327,292 to 2,328,014
_RS10460
Group
Condition
ABZR86
_RS10440
ABZR86
_RS10445
ABZR86
_RS10450
ABZR86
_RS10455
ABZR86
_RS10460
nitrogen source
L-Proline (N)
-0.7
N.D.
-0.2
-0.2
-0.2
stress
Fusidic 0.4 mg/ml
-0.2
N.D.
-0.2
-0.3
-0.1
stress
Nalidixic 0.08 mg/ml
+0.1
N.D.
-0.3
-0.2
-0.3
carbon source
D-Galactose (C)
-0.5
N.D.
+0.2
-0.2
+0.1
stress
sodium fluoride 60 mM
-0.4
N.D.
+0.2
+0.1
-0.1
stress
Paraquat dichloride 0.05 mg/ml
-0.4
N.D.
+0.3
-0.1
-0.0
stress
Paraquat dichloride 0.2 mg/ml
+0.3
N.D.
+0.1
-0.4
-0.2
stress
Chloride 250 mM
-0.2
N.D.
+0.3
-0.1
-0.2
stress
Chloramphenicol 0.012 mg/ml
-0.2
N.D.
+0.4
-0.0
-0.3
stress
sodium fluoride 40 mM
+0.3
N.D.
-0.1
-0.1
-0.1
stress
Sisomicin 0.016 mg/ml
-0.1
N.D.
+0.3
-0.2
-0.1
carbon source
a-Cyclodextrin (C)
-0.4
N.D.
+0.3
-0.0
+0.1
lb
LB
+0.5
N.D.
-0.2
-0.2
-0.1
stress
Paraquat dichloride 0.1 mg/ml
-0.3
N.D.
+0.2
+0.1
-0.0
nitrogen source
L-Leucine (N)
+0.3
N.D.
-0.1
+0.2
-0.2
carbon source
pyruvate (C)
-0.0
N.D.
+0.1
-0.2
+0.3
stress
Thallium(I) acetate 0.008 mg/ml
+0.6
N.D.
-0.2
-0.1
-0.0
stress
Chlorite 0.32 mM
-0.4
N.D.
+1.0
-0.3
-0.1
stress
nitrate 200 mM
-0.1
N.D.
+0.5
-0.1
+0.2
carbon source
D-Fructose (C)
+0.3
N.D.
+0.2
-0.3
+0.2
carbon source
D-Fructose (C)
+0.3
N.D.
+0.4
+0.1
-0.3
carbon source
NAG (C)
-0.2
N.D.
+0.3
+0.0
+0.3
nitrogen source
L-Asparagine (N)
+0.7
N.D.
-0.3
-0.1
+0.1
carbon source
D-Glucose (C)
+0.2
N.D.
+0.2
-0.1
+0.2
stress
Spectinomycin 0.04 mg/ml
+0.5
N.D.
+0.3
-0.3
+0.2
stress
perchlorate 75 mM
+0.4
N.D.
+0.5
-0.3
-0.0
stress
Carbenicillin 0.04 mg/ml
+0.3
N.D.
+0.2
+0.1
+0.0
stress
Tetracycline 0.024 mg/ml
+0.1
N.D.
+0.4
+0.2
-0.0
stress
A22 0.02 mg/ml
+0.3
N.D.
+0.2
+0.2
-0.0
nitrogen source
nitrate (N)
+0.3
N.D.
+0.2
+0.1
+0.2
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