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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS10315 and ABZR86_RS10320 are separated by 0 nucleotides
ABZR86_RS10320 and ABZR86_RS10325 are separated by 24 nucleotides
ABZR86_RS10325 and ABZR86_RS10330 overlap by 11 nucleotides
ABZR86_RS10330 and ABZR86_RS10335 are separated by 412 nucleotides
ABZR86_RS10315: ABZR86_RS10315 - Imm42 family immunity protein, at 2,285,143 to 2,285,661
_RS10315
ABZR86_RS10320: ABZR86_RS10320 - RHS repeat-associated core domain-containing protein, at 2,285,662 to 2,286,384
_RS10320
ABZR86_RS10325: ABZR86_RS10325 - RHS repeat protein, at 2,286,409 to 2,288,874
_RS10325
ABZR86_RS10330: ABZR86_RS10330 - DUF6531 domain-containing protein, at 2,288,864 to 2,290,471
_RS10330
ABZR86_RS10335: ABZR86_RS10335 - chemotaxis protein CheW, at 2,290,884 to 2,291,360
_RS10335
Group
Condition
ABZR86
_RS10315
ABZR86
_RS10320
ABZR86
_RS10325
ABZR86
_RS10330
ABZR86
_RS10335
carbon source
D-Galactose (C)
-1.6
-0.1
-0.1
+0.0
+0.0
nitrogen source
D-Glucosamine Hydrochloride (N)
-1.4
-0.1
+0.0
-0.0
+0.3
stress
Chlorite 0.32 mM
-1.1
-0.0
+0.1
-0.0
-0.1
stress
Chloramphenicol 0.012 mg/ml
-0.9
-0.0
+0.1
+0.0
-0.2
lb
LB
-1.2
+0.2
-0.0
+0.0
+0.0
carbon source
NAG (C)
-1.0
-0.0
-0.0
+0.0
+0.2
carbon source
D-Fructose (C)
-1.9
+0.2
-0.0
+0.1
+0.8
stress
Paraquat dichloride 0.1 mg/ml
-1.0
+0.1
+0.0
+0.0
+0.2
stress
Cisplatin 0.0032 mg/ml
-0.6
+0.2
-0.0
+0.0
-0.3
stress
Nalidixic 0.02 mg/ml
-1.0
+0.0
+0.0
-0.1
+0.4
nitrogen source
N-Acetyl-D-glucosamine (N)
-1.1
+0.0
+0.1
+0.0
+0.4
carbon source
a-Cyclodextrin (C)
-0.8
-0.1
-0.0
-0.0
+0.3
carbon source
NAG (C)
-1.2
-0.0
-0.0
+0.1
+0.5
stress
A22 0.01 mg/ml
-1.0
+0.0
+0.1
-0.0
+0.3
stress
perchlorate 75 mM
-1.2
-0.0
+0.1
+0.1
+0.4
carbon source
a-Cyclodextrin (C)
-0.7
-0.1
+0.0
-0.0
+0.2
stress
Carbenicillin 0.02 mg/ml
-0.8
+0.1
+0.1
+0.0
+0.2
stress
D-Cycloserine 0.032 mg/ml
-0.9
+0.0
+0.0
-0.1
+0.4
stress
Paraquat dichloride 0.05 mg/ml
-1.0
+0.1
+0.1
+0.1
+0.2
stress
Nalidixic 0.01 mg/ml
-0.8
-0.0
-0.0
-0.0
+0.3
stress
Fusidic 0.4 mg/ml
-0.9
+0.1
+0.2
-0.0
+0.2
lb
LB
-0.8
+0.1
+0.2
+0.2
-0.1
stress
nitrate 200 mM
-1.0
+0.1
+0.0
+0.0
+0.4
carbon source
D-Fructose (C)
-0.8
-0.1
+0.1
+0.1
+0.5
nitrogen source
nitrate (N)
-0.7
-0.0
-0.0
-0.0
+0.4
nitrogen source
L-Lysine (N)
-0.7
-0.1
+0.1
-0.1
+0.5
stress
sodium fluoride 40 mM
-0.7
+0.1
+0.1
+0.1
+0.1
stress
Chloride 250 mM
-0.8
+0.0
+0.0
+0.0
+0.6
stress
Zinc 2.5 mM
-0.6
-0.1
-0.0
-0.0
+0.8
stress
Ceftazidime 0.1 mg/ml
-0.4
+0.2
+0.2
+0.2
+0.1
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