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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS10075 and ABZR86_RS10080 are separated by 264 nucleotides
ABZR86_RS10080 and ABZR86_RS10085 are separated by 298 nucleotides
ABZR86_RS10085 and ABZR86_RS10090 are separated by 176 nucleotides
ABZR86_RS10090 and ABZR86_RS10095 overlap by 1 nucleotides
ABZR86_RS10075: ABZR86_RS10075 - prolipoprotein diacylglyceryl transferase, at 2,235,827 to 2,236,657
_RS10075
ABZR86_RS10080: ABZR86_RS10080 - prolyl oligopeptidase family serine peptidase, at 2,236,922 to 2,238,892
_RS10080
ABZR86_RS10085: ABZR86_RS10085 - TonB-dependent receptor, at 2,239,191 to 2,242,049
_RS10085
ABZR86_RS10090: ABZR86_RS10090 - TPM domain-containing protein, at 2,242,226 to 2,242,729
_RS10090
ABZR86_RS10095: ABZR86_RS10095 - TPM domain-containing protein, at 2,242,729 to 2,243,622
_RS10095
Group
Condition
ABZR86
_RS10075
ABZR86
_RS10080
ABZR86
_RS10085
ABZR86
_RS10090
ABZR86
_RS10095
stress
Tetracycline 0.024 mg/ml
N.D.
-0.1
-1.7
-0.0
+0.0
stress
Fusidic 0.4 mg/ml
N.D.
+0.0
-0.8
-0.3
-0.2
stress
Carbenicillin 0.02 mg/ml
N.D.
-0.1
-0.7
-0.3
-0.3
stress
Sisomicin 0.016 mg/ml
N.D.
-0.0
-1.3
+0.2
-0.1
stress
Nalidixic 0.08 mg/ml
N.D.
-0.1
-0.5
+0.0
-0.3
stress
Carbenicillin 0.04 mg/ml
N.D.
+0.0
-0.8
+0.1
-0.0
stress
Tetracycline 0.012 mg/ml
N.D.
-0.1
-0.5
+0.0
+0.0
carbon source
a-Cyclodextrin (C)
N.D.
-0.0
-0.1
-0.3
-0.1
nitrogen source
L-Leucine (N)
N.D.
+0.0
-0.2
-0.2
-0.1
stress
Ceftazidime 0.05 mg/ml
N.D.
-0.0
-0.5
-0.1
+0.1
stress
Thallium(I) acetate 0.008 mg/ml
N.D.
-0.1
-0.5
+0.0
+0.2
carbon source
L-Alanine (C)
N.D.
+0.0
+0.2
-0.4
-0.1
stress
Fusidic 0.2 mg/ml
N.D.
+0.0
-0.6
+0.1
+0.2
stress
Nalidixic 0.04 mg/ml
N.D.
-0.1
-0.4
+0.1
+0.1
stress
Nalidixic 0.01 mg/ml
N.D.
-0.0
-0.2
-0.1
+0.2
stress
Chloride 250 mM
N.D.
-0.0
+0.0
+0.3
-0.2
stress
Ceftazidime 0.1 mg/ml
N.D.
+0.1
-0.3
+0.2
+0.1
nitrogen source
L-Isoleucine (N)
N.D.
-0.1
-0.2
+0.2
+0.2
lb
LB
N.D.
+0.1
+0.1
+0.4
-0.3
carbon source
a-Cyclodextrin (C)
N.D.
-0.0
-0.0
+0.4
+0.1
stress
Cisplatin 0.0032 mg/ml
N.D.
-0.0
+0.1
+0.3
+0.1
carbon source
D-Fructose (C)
N.D.
+0.1
-0.0
+0.2
+0.3
stress
sodium fluoride 40 mM
N.D.
+0.1
+0.2
+0.0
+0.3
stress
Zinc 2.5 mM
N.D.
+0.1
+0.7
-0.3
+0.1
stress
Dimethyl Sulfoxide 7.5 vol%
N.D.
+0.1
+0.4
+0.0
+0.2
stress
nitrate 200 mM
N.D.
+0.1
+0.6
+0.1
-0.1
stress
Spectinomycin 0.04 mg/ml
N.D.
+0.0
-0.1
+0.5
+0.3
lb
LB
N.D.
+0.0
+0.1
+0.4
+0.3
nitrogen source
L-Asparagine (N)
N.D.
-0.0
+0.1
+0.8
+0.1
stress
perchlorate 75 mM
N.D.
+0.2
+0.7
+0.2
+0.0
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