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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS09935 and ABZR86_RS09940 are separated by 41 nucleotides
ABZR86_RS09940 and ABZR86_RS09945 are separated by 87 nucleotides
ABZR86_RS09945 and ABZR86_RS09950 are separated by 150 nucleotides
ABZR86_RS09950 and ABZR86_RS09955 are separated by 155 nucleotides
ABZR86_RS09935: ABZR86_RS09935 - DUF4105 domain-containing protein, at 2,204,391 to 2,205,608
_RS09935
ABZR86_RS09940: ABZR86_RS09940 - magnesium/cobalt transporter CorA, at 2,205,650 to 2,206,681
_RS09940
ABZR86_RS09945: ABZR86_RS09945 - S9 family peptidase, at 2,206,769 to 2,208,871
_RS09945
ABZR86_RS09950: ABZR86_RS09950 - peptide MFS transporter, at 2,209,022 to 2,210,752
_RS09950
ABZR86_RS09955: ABZR86_RS09955 - pilin, at 2,210,908 to 2,211,351
_RS09955
Group
Condition
ABZR86
_RS09935
ABZR86
_RS09940
ABZR86
_RS09945
ABZR86
_RS09950
ABZR86
_RS09955
stress
nitrate 150 mM
-6.0
-0.2
-0.0
+0.1
-0.2
stress
Tetracycline 0.012 mg/ml
-6.0
+0.1
-0.1
+0.0
-0.1
stress
Chloramphenicol 0.012 mg/ml
-5.7
-0.3
+0.0
+0.0
+0.1
stress
Nalidixic 0.02 mg/ml
-6.0
-0.0
+0.1
+0.1
-0.0
stress
A22 0.02 mg/ml
-5.8
-0.1
-0.1
+0.2
-0.1
stress
Nalidixic 0.01 mg/ml
-5.7
+0.2
+0.0
-0.0
-0.3
stress
Paraquat dichloride 0.1 mg/ml
-5.8
+0.0
+0.0
+0.1
-0.1
stress
perchlorate 75 mM
-5.7
+0.1
-0.1
+0.1
-0.1
lb
LB
-5.4
-0.2
-0.1
+0.1
-0.2
stress
Fusidic 0.2 mg/ml
-5.8
+0.3
-0.1
-0.1
+0.0
stress
Chloramphenicol 0.008 mg/ml
-5.7
+0.1
-0.1
+0.2
+0.0
stress
Carbenicillin 0.04 mg/ml
-5.8
+0.1
+0.0
+0.2
+0.1
stress
Tetracycline 0.024 mg/ml
-5.6
+0.3
-0.1
+0.1
-0.1
carbon source
pyruvate (C)
-4.7
-0.3
-0.0
+0.1
-0.4
stress
Sisomicin 0.016 mg/ml
-5.7
-0.1
+0.1
+0.4
+0.0
stress
Carbenicillin 0.02 mg/ml
-5.7
+0.1
+0.1
+0.1
+0.2
stress
Chlorite 0.32 mM
-5.6
-0.1
+0.1
+0.2
+0.2
stress
Ceftazidime 0.1 mg/ml
-5.8
+0.3
-0.0
+0.3
+0.0
stress
Zinc 2.5 mM
-5.7
+0.8
+0.0
-0.0
-0.2
carbon source
L-Proline (C)
-4.6
-0.3
+0.1
+0.0
-0.1
carbon source
NAG (C)
-4.6
-0.4
+0.2
+0.1
-0.2
nitrogen source
L-Asparagine (N)
-5.2
+0.2
-0.1
+0.2
+0.3
carbon source
pyruvate (C)
-4.3
-0.2
+0.1
+0.1
-0.2
lb
LB
-5.4
+0.7
-0.0
+0.3
+0.0
lb
LB
-4.1
-0.1
-0.1
+0.1
-0.0
stress
Ceftazidime 0.05 mg/ml
-4.1
-0.1
+0.0
-0.0
+0.0
stress
Nalidixic 0.04 mg/ml
-3.8
-0.2
+0.1
-0.0
-0.1
carbon source
NAG (C)
-3.6
-0.1
-0.0
-0.1
-0.2
nitrogen source
N-Acetyl-D-glucosamine (N)
-4.1
+0.1
+0.1
+0.2
-0.1
carbon source
D-Glucose (C)
-3.3
-0.3
-0.1
+0.2
+0.1
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