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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS09550 and ABZR86_RS09555 are separated by 73 nucleotides
ABZR86_RS09555 and ABZR86_RS09560 are separated by 90 nucleotides
ABZR86_RS09560 and ABZR86_RS09565 are separated by 54 nucleotides
ABZR86_RS09565 and ABZR86_RS09570 are separated by 371 nucleotides
ABZR86_RS09550: ABZR86_RS09550 - hypothetical protein, at 2,127,787 to 2,130,213
_RS09550
ABZR86_RS09555: ABZR86_RS09555 - DUF3142 domain-containing protein, at 2,130,287 to 2,131,492
_RS09555
ABZR86_RS09560: ABZR86_RS09560 - RtcB family protein, at 2,131,583 to 2,132,794
_RS09560
ABZR86_RS09565: ABZR86_RS09565 - slipin family protein, at 2,132,849 to 2,133,973
_RS09565
ABZR86_RS09570: ABZR86_RS09570 - tRNA-Val, at 2,134,345 to 2,134,415
_RS09570
Group
Condition
ABZR86
_RS09550
ABZR86
_RS09555
ABZR86
_RS09560
ABZR86
_RS09565
ABZR86
_RS09570
stress
Tetracycline 0.012 mg/ml
-0.1
-0.3
-0.1
-0.1
N.D.
stress
Cisplatin 0.0032 mg/ml
+0.0
-0.4
+0.0
-0.1
N.D.
nitrogen source
L-Leucine (N)
-0.0
-0.4
+0.0
-0.1
N.D.
stress
Zinc 2.5 mM
-0.0
-0.2
-0.2
-0.0
N.D.
stress
Tetracycline 0.024 mg/ml
+0.0
-0.2
+0.0
-0.3
N.D.
stress
Sisomicin 0.016 mg/ml
-0.1
-0.4
+0.2
-0.1
N.D.
stress
Paraquat dichloride 0.1 mg/ml
+0.1
-0.2
-0.0
-0.2
N.D.
nitrogen source
nitrate (N)
+0.1
+0.2
-0.1
-0.6
N.D.
stress
perchlorate 75 mM
-0.1
-0.4
+0.1
+0.0
N.D.
nitrogen source
N-Acetyl-D-glucosamine (N)
-0.0
+0.1
-0.3
-0.1
N.D.
carbon source
D-Galactose (C)
-0.0
-0.2
-0.2
+0.2
N.D.
stress
Ceftazidime 0.05 mg/ml
+0.0
-0.4
+0.1
+0.1
N.D.
lb
LB
+0.0
+0.2
-0.0
-0.3
N.D.
nitrogen source
L-Proline (N)
+0.2
-0.3
+0.1
-0.2
N.D.
stress
Nalidixic 0.01 mg/ml
+0.1
-0.2
+0.2
-0.1
N.D.
stress
Chloramphenicol 0.012 mg/ml
+0.1
+0.2
+0.0
-0.2
N.D.
nitrogen source
Glucuronamide (N)
+0.0
-0.1
+0.2
-0.2
N.D.
lb
LB
-0.1
+0.3
+0.0
-0.1
N.D.
carbon source
a-Cyclodextrin (C)
-0.0
+0.1
-0.2
+0.2
N.D.
carbon source
D-Fructose (C)
-0.0
-0.1
-0.2
+0.5
N.D.
stress
Thallium(I) acetate 0.008 mg/ml
-0.1
+0.2
+0.1
+0.1
N.D.
carbon source
L-Alanine (C)
-0.1
+0.1
-0.1
+0.3
N.D.
carbon source
D-Glucose (C)
-0.1
+0.4
-0.1
+0.1
N.D.
carbon source
NAG (C)
+0.1
+0.1
-0.1
+0.3
N.D.
carbon source
D-Glucose (C)
+0.0
+0.3
+0.0
+0.2
N.D.
stress
Thallium(I) acetate 0.016 mg/ml
+0.1
+0.1
+0.2
+0.0
N.D.
carbon source
D-Fructose (C)
+0.0
+0.4
-0.1
+0.2
N.D.
carbon source
D-Maltose (C)
+0.1
+0.2
-0.0
+0.3
N.D.
nitrogen source
L-Isoleucine (N)
-0.1
+0.3
+0.3
+0.1
N.D.
nitrogen source
L-Asparagine (N)
+0.2
+0.6
+0.1
+0.1
N.D.
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