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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS09275 and ABZR86_RS09280 are separated by 17 nucleotides
ABZR86_RS09280 and ABZR86_RS09285 are separated by 28 nucleotides
ABZR86_RS09285 and ABZR86_RS09290 are separated by 570 nucleotides
ABZR86_RS09290 and ABZR86_RS09295 are separated by 78 nucleotides
ABZR86_RS09275: ABZR86_RS09275 - aspartate/glutamate racemase family protein, at 2,066,214 to 2,066,906
_RS09275
ABZR86_RS09280: ABZR86_RS09280 - amino acid permease, at 2,066,924 to 2,068,285
_RS09280
ABZR86_RS09285: ABZR86_RS09285 - rhomboid family intramembrane serine protease, at 2,068,314 to 2,068,928
_RS09285
ABZR86_RS09290: ABZR86_RS09290 - M28 family peptidase, at 2,069,499 to 2,071,145
_RS09290
ABZR86_RS09295: ABZR86_RS09295 - nucleoside-diphosphate sugar epimerase, at 2,071,224 to 2,071,868
_RS09295
Group
Condition
ABZR86
_RS09275
ABZR86
_RS09280
ABZR86
_RS09285
ABZR86
_RS09290
ABZR86
_RS09295
stress
Sisomicin 0.016 mg/ml
-0.0
+0.3
-1.7
+0.3
-0.7
nitrogen source
L-Leucine (N)
+0.1
-1.0
+0.1
-0.1
-0.7
stress
Paraquat dichloride 0.2 mg/ml
+0.0
-0.2
-0.3
-0.0
-0.8
stress
sodium fluoride 60 mM
-0.0
-0.2
-0.0
-0.1
-1.0
stress
A22 0.01 mg/ml
-0.2
-0.0
+0.1
+0.0
-1.1
stress
Nalidixic 0.02 mg/ml
-0.2
-0.2
-0.2
-0.2
-0.3
stress
Nalidixic 0.08 mg/ml
+0.2
-0.4
-0.4
-0.0
-0.6
stress
perchlorate 75 mM
-0.1
+0.0
-0.1
-0.1
-0.6
stress
Carbenicillin 0.02 mg/ml
-0.2
-0.1
-0.2
+0.1
-0.4
nitrogen source
L-Arginine (N)
-0.0
-0.1
+0.0
-0.0
-0.8
nitrogen source
nitrate (N)
-0.2
-0.1
-0.2
-0.1
-0.3
nitrogen source
L-Asparagine (N)
-0.3
-0.1
+0.5
+0.2
-1.2
stress
Zinc 2.5 mM
+0.0
-0.2
-0.2
-0.2
-0.3
lb
LB
-0.2
+0.0
-0.0
+0.2
-0.9
stress
Ceftazidime 0.1 mg/ml
-0.2
-0.2
+0.1
-0.2
-0.2
carbon source
L-Alanine (C)
-0.0
-0.4
+0.2
-0.1
-0.2
carbon source
L-Alanine (C)
-0.1
-0.5
+0.1
+0.1
-0.2
carbon source
pyruvate (C)
+0.1
-0.1
+0.0
+0.1
-0.6
stress
Spectinomycin 0.04 mg/ml
+0.5
+0.0
-0.5
+0.1
-0.7
stress
Thallium(I) acetate 0.016 mg/ml
-0.3
-0.2
-0.0
-0.0
+0.4
carbon source
D-Galactose (C)
+0.3
-0.1
+0.1
+0.2
-0.5
carbon source
L-Proline (C)
+0.2
+0.0
+0.3
-0.1
-0.4
carbon source
D-Fructose (C)
+0.3
-0.0
+0.2
+0.1
-0.5
carbon source
D-Cellobiose (C)
+0.3
-0.1
+0.1
+0.0
-0.2
stress
Fusidic 0.2 mg/ml
-0.1
-0.1
-0.1
-0.2
+0.7
stress
Chlorite 0.32 mM
-0.1
+0.6
+0.1
-0.0
-0.3
carbon source
D-Glucose (C)
+0.3
+0.2
+0.2
+0.1
-0.4
lb
LB
-0.2
+0.0
+0.0
+0.1
+0.5
stress
Nalidixic 0.04 mg/ml
+0.1
-0.1
-0.1
+0.1
+0.5
stress
Tetracycline 0.024 mg/ml
+0.4
+0.0
+0.1
+0.3
+0.1
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ABZR86_RS09280
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ABZR86_RS09285
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