Fitness for 5 genes in Dyella japonica UNC79MFTsu3.2

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500 ntABZR86_RS09195 and ABZR86_RS09200 are separated by 33 nucleotidesABZR86_RS09200 and ABZR86_RS09205 are separated by 37 nucleotidesABZR86_RS09205 and ABZR86_RS09210 overlap by 4 nucleotidesABZR86_RS09210 and ABZR86_RS09215 are separated by 240 nucleotides ABZR86_RS09195: ABZR86_RS09195 - PilC/PilY family type IV pilus protein, at 2,043,915 to 2,048,165 _RS09195 ABZR86_RS09200: ABZR86_RS09200 - PilX N-terminal domain-containing pilus assembly protein, at 2,048,199 to 2,048,864 _RS09200 ABZR86_RS09205: ABZR86_RS09205 - PilW family protein, at 2,048,902 to 2,050,296 _RS09205 ABZR86_RS09210: ABZR86_RS09210 - type IV pilus modification protein PilV, at 2,050,293 to 2,050,889 _RS09210 ABZR86_RS09215: ABZR86_RS09215 - GspH/FimT family pseudopilin, at 2,051,130 to 2,051,717 _RS09215
Group Condition ABZR86_RS09195 ABZR86_RS09200 ABZR86_RS09205 ABZR86_RS09210 ABZR86_RS09215
stress Nalidixic 0.02 mg/ml -0.1 -0.4 -0.2 -0.4 -0.2
lb LB -0.1 +0.2 -0.2 +0.1 -0.7
carbon source D-Fructose (C) -0.1 +0.2 -0.0 -0.6 +0.1
stress Carbenicillin 0.04 mg/ml +0.1 -0.1 +0.1 -0.4 +0.2
carbon source D-Fructose (C) -0.2 +0.4 -0.2 +0.3 -0.3
carbon source D-Cellobiose (C) +0.4 +0.3 +0.0 -0.2 -0.1
stress Spectinomycin 0.04 mg/ml -0.1 +0.1 -0.1 -0.2 +0.8
carbon source D-Glucose (C) +0.2 +0.2 +0.3 +0.4 -0.4
nitrogen source nitrate (N) +0.3 +0.4 +0.2 +0.1 -0.3
nitrogen source L-Lysine (N) +0.2 +0.2 +0.3 +0.2 -0.3
carbon source L-Alanine (C) +0.1 +0.4 +0.2 +0.4 -0.1
stress Zinc 2.5 mM -0.2 +0.6 +0.0 +0.4 +0.1
stress Nalidixic 0.08 mg/ml +0.2 +0.2 +0.4 +0.3 -0.1
carbon source D-Glucose (C) +0.3 +0.5 +0.2 +0.0 -0.0
carbon source D-Maltose (C) +0.4 +0.3 +0.3 +0.0 +0.0
carbon source pyruvate (C) +0.3 +0.1 +0.4 +0.2 +0.1
carbon source D-Cellobiose (C) +0.3 +0.5 +0.3 +0.5 -0.3
carbon source pyruvate (C) +0.6 +0.7 +0.3 +0.2 -0.5
nitrogen source L-Proline (N) +0.3 +0.5 +0.2 +0.4 -0.1
carbon source L-Proline (C) +0.4 +0.4 +0.3 +0.3 -0.0
carbon source D-Maltose (C) +0.3 +0.4 +0.3 +0.5 +0.1
nitrogen source Glucuronamide (N) +0.4 +0.5 +0.4 +0.6 -0.2
carbon source a-Cyclodextrin (C) +0.6 +0.8 +0.4 +0.2 -0.1
carbon source a-Cyclodextrin (C) +0.5 +0.3 +0.5 +0.5 +0.2
nitrogen source L-Isoleucine (N) +0.5 +0.7 +0.5 +0.6 +0.0
carbon source NAG (C) +0.6 +0.6 +0.6 +0.8 -0.2
carbon source NAG (C) +0.7 +0.7 +0.7 +0.7 +0.3
nitrogen source D-Glucosamine Hydrochloride (N) +0.9 +1.1 +0.9 +0.8 +0.1
carbon source D-Galactose (C) +0.9 +0.8 +1.0 +1.1 -0.1
nitrogen source N-Acetyl-D-glucosamine (N) +0.9 +0.9 +1.0 +1.0 +0.1
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