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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS09145 and ABZR86_RS09150 are separated by 2 nucleotides
ABZR86_RS09150 and ABZR86_RS09155 are separated by 144 nucleotides
ABZR86_RS09155 and ABZR86_RS09160 overlap by 4 nucleotides
ABZR86_RS09160 and ABZR86_RS09165 are separated by 268 nucleotides
ABZR86_RS09145: ABZR86_RS09145 - hypothetical protein, at 2,032,159 to 2,032,809
_RS09145
ABZR86_RS09150: ABZR86_RS09150 - sigma-70 family RNA polymerase sigma factor, at 2,032,812 to 2,033,324
_RS09150
ABZR86_RS09155: ABZR86_RS09155 - DUF502 domain-containing protein, at 2,033,469 to 2,034,140
_RS09155
ABZR86_RS09160: ABZR86_RS09160 - M14 family metallopeptidase, at 2,034,137 to 2,035,918
_RS09160
ABZR86_RS09165: ABZR86_RS09165 - M13 family metallopeptidase, at 2,036,187 to 2,038,316
_RS09165
Group
Condition
ABZR86
_RS09145
ABZR86
_RS09150
ABZR86
_RS09155
ABZR86
_RS09160
ABZR86
_RS09165
nitrogen source
N-Acetyl-D-glucosamine (N)
-5.1
+0.1
-0.1
-0.1
-0.1
carbon source
NAG (C)
-4.9
+0.1
-0.0
-0.2
+0.1
nitrogen source
nitrate (N)
-3.3
-0.0
+0.1
-0.1
-0.0
carbon source
NAG (C)
-3.1
-0.2
+0.1
-0.1
+0.0
stress
Spectinomycin 0.04 mg/ml
-2.8
-0.3
+0.2
+0.1
+0.0
carbon source
D-Fructose (C)
-2.5
-0.2
+0.2
-0.2
+0.1
carbon source
L-Proline (C)
-2.4
+0.1
-0.2
-0.1
+0.1
stress
Fusidic 0.4 mg/ml
-2.3
-0.5
+0.2
-0.1
+0.2
carbon source
a-Cyclodextrin (C)
-2.5
+0.2
+0.1
-0.1
+0.1
carbon source
pyruvate (C)
-1.9
-0.1
-0.2
+0.0
+0.1
carbon source
D-Maltose (C)
-1.7
-0.3
-0.1
-0.1
+0.2
stress
Paraquat dichloride 0.1 mg/ml
-1.6
-0.1
-0.4
+0.0
+0.0
carbon source
D-Fructose (C)
-2.3
+0.2
+0.1
+0.1
-0.0
carbon source
D-Maltose (C)
-2.0
-0.4
+0.3
+0.1
+0.1
carbon source
D-Glucose (C)
-2.1
+0.4
-0.2
+0.0
+0.1
stress
Zinc 2.5 mM
-1.8
-0.2
+0.2
+0.1
-0.0
stress
Sisomicin 0.016 mg/ml
-1.6
-0.1
-0.1
+0.0
-0.0
carbon source
pyruvate (C)
-1.6
-0.1
-0.1
+0.0
+0.1
carbon source
L-Alanine (C)
-1.3
-0.0
-0.2
+0.0
-0.1
carbon source
D-Glucose (C)
-1.9
+0.1
+0.1
+0.1
+0.1
carbon source
D-Cellobiose (C)
-1.6
-0.1
-0.0
+0.1
+0.2
stress
Fusidic 0.2 mg/ml
-1.0
-0.1
-0.4
-0.0
+0.1
lb
LB
-0.0
-0.7
-0.6
-0.1
+0.1
stress
A22 0.02 mg/ml
-1.1
+0.1
-0.5
+0.2
+0.1
stress
Thallium(I) acetate 0.008 mg/ml
-1.3
+0.1
-0.3
+0.1
+0.2
carbon source
D-Cellobiose (C)
-1.1
+0.2
-0.2
-0.0
+0.1
carbon source
L-Proline (C)
-1.2
+0.3
-0.0
-0.1
-0.0
nitrogen source
L-Lysine (N)
-1.2
+0.4
-0.1
+0.1
-0.1
nitrogen source
D-Glucosamine Hydrochloride (N)
-1.2
+0.4
-0.1
+0.1
-0.0
carbon source
a-Cyclodextrin (C)
-1.0
+0.4
-0.1
-0.1
+0.1
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