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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS08885 and ABZR86_RS08890 are separated by 34 nucleotides
ABZR86_RS08890 and ABZR86_RS08895 are separated by 16 nucleotides
ABZR86_RS08895 and ABZR86_RS08900 are separated by 62 nucleotides
ABZR86_RS08900 and ABZR86_RS08905 are separated by 12 nucleotides
ABZR86_RS08885: ABZR86_RS08885 - MalM family protein, at 1,984,014 to 1,984,892
_RS08885
ABZR86_RS08890: ABZR86_RS08890 - hypothetical protein, at 1,984,927 to 1,985,247
_RS08890
ABZR86_RS08895: ABZR86_RS08895 - SDR family oxidoreductase, at 1,985,264 to 1,986,055
_RS08895
ABZR86_RS08900: ABZR86_RS08900 - aldehyde dehydrogenase, at 1,986,118 to 1,987,569
_RS08900
ABZR86_RS08905: ABZR86_RS08905 - carbonate dehydratase, at 1,987,582 to 1,988,250
_RS08905
Group
Condition
ABZR86
_RS08885
ABZR86
_RS08890
ABZR86
_RS08895
ABZR86
_RS08900
ABZR86
_RS08905
carbon source
D-Fructose (C)
+0.4
-0.6
+0.6
-0.0
-5.1
carbon source
D-Maltose (C)
-0.1
+0.9
-0.1
-0.2
-4.7
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.1
-0.9
+0.5
+0.1
-3.7
carbon source
NAG (C)
-0.1
+0.5
-0.2
-0.0
-4.1
carbon source
D-Maltose (C)
+0.1
-0.3
+0.2
+0.1
-4.0
carbon source
a-Cyclodextrin (C)
+0.1
-0.7
+0.2
-0.0
-3.5
carbon source
L-Alanine (C)
-0.1
-0.1
-0.0
-0.3
-3.3
carbon source
L-Alanine (C)
-0.1
+0.8
-0.2
-0.3
-3.6
carbon source
pyruvate (C)
+0.1
+0.1
-0.2
-0.1
-3.3
carbon source
a-Cyclodextrin (C)
-0.0
+1.1
-0.2
-0.1
-4.1
lb
LB
-0.2
-3.0
+0.1
-0.1
+0.0
carbon source
D-Glucose (C)
-0.1
+1.5
-0.0
-0.1
-4.3
carbon source
pyruvate (C)
+0.0
+0.4
-0.1
-0.0
-3.3
carbon source
D-Cellobiose (C)
-0.1
+0.3
-0.1
-0.1
-3.0
carbon source
D-Glucose (C)
+0.1
-0.2
+0.2
+0.0
-3.2
nitrogen source
nitrate (N)
+0.1
-1.1
-0.2
-0.0
-1.6
carbon source
D-Cellobiose (C)
+0.2
-0.4
+0.3
-0.2
-2.7
nitrogen source
N-Acetyl-D-glucosamine (N)
+0.0
-1.5
+0.3
+0.2
-1.8
carbon source
NAG (C)
+0.1
+1.0
-0.1
-0.2
-3.5
lb
LB
+0.1
-2.5
-0.0
-0.0
-0.1
nitrogen source
L-Arginine (N)
-0.0
-1.3
-0.1
-0.1
-1.1
stress
Thallium(I) acetate 0.008 mg/ml
-0.2
-2.0
+0.3
-0.2
-0.4
lb
LB
-0.0
-2.5
+0.3
+0.0
-0.2
carbon source
D-Galactose (C)
+0.4
+1.6
+0.2
-0.0
-4.5
carbon source
L-Proline (C)
+0.0
+0.8
+0.1
+0.0
-3.1
stress
Tetracycline 0.024 mg/ml
-1.1
-1.0
+0.2
-0.3
+0.2
carbon source
L-Proline (C)
-0.0
+1.5
-0.1
+0.1
-3.4
nitrogen source
Glucuronamide (N)
-0.0
+0.5
+0.2
-0.1
-1.9
carbon source
D-Fructose (C)
+0.1
+1.6
+0.3
-0.0
-3.0
stress
Ceftazidime 0.05 mg/ml
-0.0
-1.7
+0.6
+0.2
-0.1
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