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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS08865 and ABZR86_RS08870 are separated by 14 nucleotides
ABZR86_RS08870 and ABZR86_RS08875 are separated by 303 nucleotides
ABZR86_RS08875 and ABZR86_RS08880 are separated by 165 nucleotides
ABZR86_RS08880 and ABZR86_RS08885 are separated by 7 nucleotides
ABZR86_RS08865: ABZR86_RS08865 - 30S ribosomal protein S18, at 1,981,125 to 1,981,355
_RS08865
ABZR86_RS08870: ABZR86_RS08870 - 30S ribosomal protein S6, at 1,981,370 to 1,981,810
_RS08870
ABZR86_RS08875: ABZR86_RS08875 - iron-sulfur cluster assembly accessory protein, at 1,982,114 to 1,982,440
_RS08875
ABZR86_RS08880: ABZR86_RS08880 - asparagine--tRNA ligase, at 1,982,606 to 1,984,006
_RS08880
ABZR86_RS08885: ABZR86_RS08885 - MalM family protein, at 1,984,014 to 1,984,892
_RS08885
Group
Condition
ABZR86
_RS08865
ABZR86
_RS08870
ABZR86
_RS08875
ABZR86
_RS08880
ABZR86
_RS08885
stress
Tetracycline 0.024 mg/ml
-5.6
N.D.
N.D.
N.D.
-1.1
stress
Fusidic 0.4 mg/ml
-4.8
N.D.
N.D.
N.D.
-0.8
stress
Fusidic 0.2 mg/ml
-3.0
N.D.
N.D.
N.D.
-0.2
stress
Nalidixic 0.04 mg/ml
-2.8
N.D.
N.D.
N.D.
+0.0
stress
Nalidixic 0.02 mg/ml
-2.7
N.D.
N.D.
N.D.
+0.1
stress
Nalidixic 0.01 mg/ml
-2.8
N.D.
N.D.
N.D.
+0.2
stress
sodium fluoride 60 mM
-2.5
N.D.
N.D.
N.D.
+0.1
stress
Chloramphenicol 0.012 mg/ml
-2.4
N.D.
N.D.
N.D.
-0.0
nitrogen source
N-Acetyl-D-glucosamine (N)
-2.4
N.D.
N.D.
N.D.
+0.0
stress
Chlorite 0.32 mM
-2.3
N.D.
N.D.
N.D.
+0.1
stress
Tetracycline 0.012 mg/ml
-1.8
N.D.
N.D.
N.D.
-0.3
stress
nitrate 200 mM
-1.2
N.D.
N.D.
N.D.
-0.6
stress
Dimethyl Sulfoxide 7.5 vol%
-1.9
N.D.
N.D.
N.D.
+0.0
stress
Chloride 250 mM
-1.5
N.D.
N.D.
N.D.
-0.1
stress
Nalidixic 0.08 mg/ml
-1.5
N.D.
N.D.
N.D.
-0.0
stress
perchlorate 75 mM
-1.2
N.D.
N.D.
N.D.
-0.3
nitrogen source
nitrate (N)
-1.4
N.D.
N.D.
N.D.
+0.1
lb
LB
-1.3
N.D.
N.D.
N.D.
+0.1
stress
sodium fluoride 40 mM
-1.1
N.D.
N.D.
N.D.
-0.0
stress
Chloramphenicol 0.008 mg/ml
-1.1
N.D.
N.D.
N.D.
+0.1
carbon source
pyruvate (C)
+1.2
N.D.
N.D.
N.D.
+0.0
carbon source
NAG (C)
+1.1
N.D.
N.D.
N.D.
+0.1
carbon source
D-Glucose (C)
+1.6
N.D.
N.D.
N.D.
-0.1
carbon source
D-Cellobiose (C)
+1.5
N.D.
N.D.
N.D.
+0.2
carbon source
D-Maltose (C)
+1.7
N.D.
N.D.
N.D.
-0.1
carbon source
D-Fructose (C)
+1.4
N.D.
N.D.
N.D.
+0.4
carbon source
D-Fructose (C)
+1.9
N.D.
N.D.
N.D.
+0.1
carbon source
a-Cyclodextrin (C)
+2.1
N.D.
N.D.
N.D.
-0.0
carbon source
L-Alanine (C)
+3.8
N.D.
N.D.
N.D.
-0.1
carbon source
L-Alanine (C)
+3.8
N.D.
N.D.
N.D.
-0.1
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