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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS08475 and ABZR86_RS08480 are separated by 69 nucleotides
ABZR86_RS08480 and ABZR86_RS08485 are separated by 144 nucleotides
ABZR86_RS08485 and ABZR86_RS08490 are separated by 200 nucleotides
ABZR86_RS08490 and ABZR86_RS08495 are separated by 162 nucleotides
ABZR86_RS08475: ABZR86_RS08475 - 2-methylcitrate synthase, at 1,891,655 to 1,892,800
_RS08475
ABZR86_RS08480: ABZR86_RS08480 - methylisocitrate lyase, at 1,892,870 to 1,893,757
_RS08480
ABZR86_RS08485: ABZR86_RS08485 - dicarboxylate/amino acid:cation symporter, at 1,893,902 to 1,895,218
_RS08485
ABZR86_RS08490: ABZR86_RS08490 - alkyl hydroperoxide reductase subunit C, at 1,895,419 to 1,895,982
_RS08490
ABZR86_RS08495: ABZR86_RS08495 - alkyl hydroperoxide reductase subunit F, at 1,896,145 to 1,897,728
_RS08495
Group
Condition
ABZR86
_RS08475
ABZR86
_RS08480
ABZR86
_RS08485
ABZR86
_RS08490
ABZR86
_RS08495
stress
Sisomicin 0.016 mg/ml
-0.1
-3.4
-0.1
+0.1
-0.2
nitrogen source
L-Arginine (N)
-0.6
-1.1
-0.2
-0.5
-0.4
carbon source
D-Galactose (C)
-0.4
-2.2
+0.3
-0.1
-0.2
carbon source
L-Alanine (C)
-0.6
-2.3
+0.2
+0.1
+0.1
nitrogen source
L-Leucine (N)
-0.7
-1.1
-0.1
-0.3
-0.2
carbon source
pyruvate (C)
-1.3
-1.0
-0.1
-0.0
-0.0
carbon source
pyruvate (C)
-1.0
-1.4
+0.0
+0.2
-0.2
stress
Thallium(I) acetate 0.016 mg/ml
-0.5
-0.4
-0.2
-0.4
-0.7
carbon source
NAG (C)
-1.0
-0.9
-0.1
-0.4
+0.2
carbon source
a-Cyclodextrin (C)
-0.6
-0.9
-0.0
-0.1
-0.3
carbon source
D-Glucose (C)
-0.6
-0.6
-0.3
+0.1
-0.5
nitrogen source
L-Lysine (N)
-0.2
-1.1
-0.2
+0.3
-0.6
stress
Ceftazidime 0.05 mg/ml
-0.3
-1.0
+0.2
-0.5
-0.2
stress
Chloramphenicol 0.012 mg/ml
-0.1
-0.5
+0.2
-1.0
-0.2
nitrogen source
nitrate (N)
-0.7
-1.0
-0.1
-0.0
+0.1
carbon source
L-Alanine (C)
-0.8
-1.4
+0.1
+0.3
+0.2
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.0
-2.3
+0.1
+1.0
-0.3
nitrogen source
Glucuronamide (N)
-0.1
-1.5
-0.2
+0.5
-0.1
stress
Tetracycline 0.024 mg/ml
+0.1
-2.1
+0.5
+0.8
-0.4
nitrogen source
L-Isoleucine (N)
-0.4
-1.4
+0.3
+0.6
+0.0
stress
Nalidixic 0.01 mg/ml
-0.6
+0.6
-0.3
+0.2
-0.5
stress
nitrate 200 mM
-0.8
-0.4
+0.4
+0.3
+0.1
nitrogen source
L-Asparagine (N)
+0.1
-1.6
+0.2
+0.5
+0.5
stress
Fusidic 0.4 mg/ml
-0.2
-0.9
+0.3
+0.7
-0.2
stress
Chloride 250 mM
-0.5
-0.6
+0.3
+0.7
-0.1
stress
Chlorite 0.32 mM
+0.4
+1.2
+0.2
-1.4
+0.5
stress
Thallium(I) acetate 0.008 mg/ml
+0.5
-0.7
+0.0
+1.6
+0.1
stress
Zinc 2.5 mM
-0.2
+0.5
+0.5
+0.4
+0.3
stress
Nalidixic 0.04 mg/ml
-0.3
+2.1
+0.1
+0.1
-0.2
stress
Nalidixic 0.08 mg/ml
+0.4
+1.3
+0.0
+0.1
+0.6
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