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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS08420 and ABZR86_RS08425 are separated by 187 nucleotides
ABZR86_RS08425 and ABZR86_RS08430 are separated by 99 nucleotides
ABZR86_RS08430 and ABZR86_RS08435 are separated by 2 nucleotides
ABZR86_RS08435 and ABZR86_RS08440 are separated by 341 nucleotides
ABZR86_RS08420: ABZR86_RS08420 - OmpA family protein, at 1,877,943 to 1,879,058
_RS08420
ABZR86_RS08425: ABZR86_RS08425 - bifunctional 2-methylcitrate dehydratase/aconitate hydratase, at 1,879,246 to 1,880,697
_RS08425
ABZR86_RS08430: ABZR86_RS08430 - 2-methylaconitate cis-trans isomerase PrpF, at 1,880,797 to 1,881,996
_RS08430
ABZR86_RS08435: ABZR86_RS08435 - Fe/S-dependent 2-methylisocitrate dehydratase AcnD, at 1,881,999 to 1,884,608
_RS08435
ABZR86_RS08440: ABZR86_RS08440 - TerC family protein, at 1,884,950 to 1,885,636
_RS08440
Group
Condition
ABZR86
_RS08420
ABZR86
_RS08425
ABZR86
_RS08430
ABZR86
_RS08435
ABZR86
_RS08440
stress
Sisomicin 0.016 mg/ml
+0.3
+0.2
-3.5
-4.4
-1.1
stress
Fusidic 0.4 mg/ml
-0.3
+0.0
-3.4
-2.1
+0.4
stress
Thallium(I) acetate 0.016 mg/ml
-0.0
-0.3
-0.4
-0.9
-0.7
stress
Cisplatin 0.0032 mg/ml
+0.1
+0.1
-1.1
-1.5
+0.1
stress
A22 0.02 mg/ml
+0.2
+0.2
-0.3
-2.1
-0.2
stress
Paraquat dichloride 0.05 mg/ml
+0.1
+0.3
-0.8
-1.0
-0.5
carbon source
D-Glucose (C)
-0.4
-0.1
-0.4
-0.3
-0.7
stress
Thallium(I) acetate 0.008 mg/ml
+0.1
+0.2
-1.0
-1.9
+0.7
lb
LB
+0.3
+0.5
-1.4
-1.4
+0.2
stress
Chloride 250 mM
-0.0
+0.0
-0.8
-1.1
+0.1
stress
A22 0.01 mg/ml
+0.2
+0.1
-1.0
-0.4
-0.5
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.7
+0.1
-1.8
+0.3
+0.6
nitrogen source
L-Isoleucine (N)
+0.9
-0.0
-1.4
-0.9
+0.0
carbon source
L-Alanine (C)
+0.1
+0.1
-0.8
-1.0
+0.2
carbon source
NAG (C)
-1.1
-0.1
+0.1
-0.3
+0.3
carbon source
D-Galactose (C)
-1.3
+0.0
-0.1
-0.7
+0.9
nitrogen source
L-Lysine (N)
+0.4
-0.3
-0.3
-0.7
-0.4
lb
LB
+0.3
+0.3
-0.8
-1.0
+0.2
nitrogen source
L-Asparagine (N)
+0.3
+0.1
+0.8
-1.5
-0.8
nitrogen source
Casamino Acids (N)
+0.5
-0.0
-0.7
-0.8
+0.3
stress
Tetracycline 0.024 mg/ml
-0.1
+0.1
+0.1
-1.4
+0.5
nitrogen source
L-Leucine (N)
+0.5
+0.1
+0.3
-1.1
+0.2
carbon source
D-Fructose (C)
+0.7
+0.1
+0.6
-0.6
-0.8
carbon source
NAG (C)
-0.9
+0.2
+0.3
+0.2
+0.9
stress
Chlorite 0.32 mM
-0.0
+0.2
+0.9
+0.9
+0.1
stress
Nalidixic 0.01 mg/ml
-0.3
-0.1
+1.5
+1.5
-0.5
stress
Nalidixic 0.02 mg/ml
-0.1
-0.2
+1.2
+1.4
-0.0
stress
sodium fluoride 60 mM
-0.0
+0.0
+1.3
+1.0
+0.2
stress
Nalidixic 0.08 mg/ml
-0.0
+0.0
+2.8
+3.1
+1.3
stress
Nalidixic 0.04 mg/ml
-0.1
-0.1
+3.4
+3.5
+0.6
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ABZR86_RS08430
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