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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS08325 and ABZR86_RS08330 are separated by 2 nucleotides
ABZR86_RS08330 and ABZR86_RS08335 are separated by 480 nucleotides
ABZR86_RS08335 and ABZR86_RS08340 are separated by 207 nucleotides
ABZR86_RS08340 and ABZR86_RS08345 are separated by 79 nucleotides
ABZR86_RS08325: ABZR86_RS08325 - helix-turn-helix domain-containing protein, at 1,855,772 to 1,856,263
_RS08325
ABZR86_RS08330: ABZR86_RS08330 - PIN domain-containing protein, at 1,856,266 to 1,856,832
_RS08330
ABZR86_RS08335: ABZR86_RS08335 - hypothetical protein, at 1,857,313 to 1,857,771
_RS08335
ABZR86_RS08340: ABZR86_RS08340 - adenylosuccinate synthase, at 1,857,979 to 1,859,271
_RS08340
ABZR86_RS08345: ABZR86_RS08345 - DUF2065 domain-containing protein, at 1,859,351 to 1,859,536
_RS08345
Group
Condition
ABZR86
_RS08325
ABZR86
_RS08330
ABZR86
_RS08335
ABZR86
_RS08340
ABZR86
_RS08345
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.9
-0.1
N.D.
-6.8
N.D.
nitrogen source
L-Proline (N)
-0.1
+0.0
N.D.
-6.9
N.D.
carbon source
L-Proline (C)
-0.5
-0.1
N.D.
-6.1
N.D.
nitrogen source
Casamino Acids (N)
-0.2
-0.1
N.D.
-6.3
N.D.
carbon source
a-Cyclodextrin (C)
-0.4
+0.2
N.D.
-6.2
N.D.
carbon source
D-Maltose (C)
-0.4
+0.2
N.D.
-6.0
N.D.
carbon source
D-Maltose (C)
-0.7
-0.1
N.D.
-5.1
N.D.
carbon source
D-Glucose (C)
-0.5
+0.3
N.D.
-5.7
N.D.
carbon source
D-Cellobiose (C)
-0.7
-0.1
N.D.
-4.9
N.D.
carbon source
NAG (C)
-0.5
+0.1
N.D.
-5.3
N.D.
nitrogen source
N-Acetyl-D-glucosamine (N)
-0.4
-0.2
N.D.
-5.0
N.D.
carbon source
D-Fructose (C)
-2.5
+0.3
N.D.
-3.2
N.D.
carbon source
pyruvate (C)
-0.3
+0.1
N.D.
-5.2
N.D.
carbon source
D-Glucose (C)
-0.7
+0.1
N.D.
-4.8
N.D.
carbon source
D-Galactose (C)
-0.5
+0.1
N.D.
-4.8
N.D.
carbon source
L-Proline (C)
-0.5
+0.2
N.D.
-4.6
N.D.
carbon source
L-Alanine (C)
-0.6
-0.1
N.D.
-4.1
N.D.
carbon source
D-Fructose (C)
-0.6
+0.4
N.D.
-4.4
N.D.
nitrogen source
Glucuronamide (N)
-0.9
-0.0
N.D.
-3.8
N.D.
carbon source
NAG (C)
-0.5
+0.1
N.D.
-4.2
N.D.
carbon source
a-Cyclodextrin (C)
-0.3
+0.1
N.D.
-4.2
N.D.
carbon source
D-Cellobiose (C)
-0.7
+0.2
N.D.
-4.0
N.D.
carbon source
L-Alanine (C)
-0.7
-0.1
N.D.
-3.7
N.D.
carbon source
pyruvate (C)
-0.6
-0.1
N.D.
-3.6
N.D.
nitrogen source
L-Leucine (N)
-0.2
-0.1
N.D.
-3.8
N.D.
nitrogen source
L-Isoleucine (N)
-0.3
-0.3
N.D.
-3.1
N.D.
nitrogen source
nitrate (N)
-0.6
-0.2
N.D.
-2.8
N.D.
nitrogen source
L-Arginine (N)
-0.3
+0.1
N.D.
-2.6
N.D.
nitrogen source
L-Lysine (N)
-0.3
-0.1
N.D.
-1.5
N.D.
nitrogen source
L-Asparagine (N)
+0.2
-0.1
N.D.
-1.7
N.D.
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