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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS08135 and ABZR86_RS08140 are separated by 78 nucleotides
ABZR86_RS08140 and ABZR86_RS08145 are separated by 138 nucleotides
ABZR86_RS08145 and ABZR86_RS08150 are separated by 96 nucleotides
ABZR86_RS08150 and ABZR86_RS08155 overlap by 4 nucleotides
ABZR86_RS08135: ABZR86_RS08135 - hypothetical protein, at 1,814,497 to 1,815,096
_RS08135
ABZR86_RS08140: ABZR86_RS08140 - iron-sulfur cluster carrier protein ApbC, at 1,815,175 to 1,816,269
_RS08140
ABZR86_RS08145: ABZR86_RS08145 - DUF2147 domain-containing protein, at 1,816,408 to 1,816,848
_RS08145
ABZR86_RS08150: ABZR86_RS08150 - DeoR/GlpR family DNA-binding transcription regulator, at 1,816,945 to 1,817,757
_RS08150
ABZR86_RS08155: ABZR86_RS08155 - HAD family hydrolase, at 1,817,754 to 1,818,392
_RS08155
Group
Condition
ABZR86
_RS08135
ABZR86
_RS08140
ABZR86
_RS08145
ABZR86
_RS08150
ABZR86
_RS08155
carbon source
D-Glucose (C)
-1.2
N.D.
-0.1
-2.1
-0.8
lb
LB
-5.6
N.D.
+0.2
+1.4
-0.0
carbon source
D-Fructose (C)
-1.8
N.D.
-0.4
-1.2
-0.6
carbon source
a-Cyclodextrin (C)
+0.3
N.D.
-0.1
-2.2
-0.9
nitrogen source
L-Asparagine (N)
-3.3
N.D.
+0.5
-0.4
+0.3
carbon source
D-Cellobiose (C)
-0.8
N.D.
-0.2
-0.7
-0.8
carbon source
D-Maltose (C)
-0.2
N.D.
+0.0
-1.3
-0.7
stress
Fusidic 0.4 mg/ml
-1.2
N.D.
-0.1
-0.6
+0.0
carbon source
D-Cellobiose (C)
-0.4
N.D.
-0.4
-0.3
-0.7
carbon source
D-Glucose (C)
+0.1
N.D.
-0.5
-0.5
-0.8
nitrogen source
N-Acetyl-D-glucosamine (N)
-1.8
N.D.
+0.2
+0.8
-1.1
nitrogen source
L-Isoleucine (N)
-0.2
N.D.
-0.4
-0.9
-0.2
stress
A22 0.01 mg/ml
-0.2
N.D.
-0.1
-1.1
-0.2
carbon source
pyruvate (C)
-1.3
N.D.
-0.2
+0.2
-0.2
carbon source
D-Maltose (C)
+0.6
N.D.
+0.0
-1.4
-0.7
carbon source
L-Proline (C)
-1.2
N.D.
-0.4
+0.4
-0.1
nitrogen source
Casamino Acids (N)
-1.1
N.D.
-0.1
-0.5
+0.4
stress
sodium fluoride 40 mM
-1.0
N.D.
-0.2
+0.5
-0.0
stress
Tetracycline 0.024 mg/ml
-0.7
N.D.
+0.8
-0.6
-0.2
stress
Zinc 2.5 mM
-1.0
N.D.
-0.1
+0.4
+0.0
carbon source
NAG (C)
+1.1
N.D.
-0.3
-0.2
-0.7
carbon source
NAG (C)
+0.5
N.D.
-0.4
+0.6
-0.6
stress
Spectinomycin 0.04 mg/ml
-1.6
N.D.
-0.4
+1.5
+0.9
stress
Tetracycline 0.012 mg/ml
-0.3
N.D.
+0.2
+1.0
-0.1
stress
Nalidixic 0.08 mg/ml
+0.6
N.D.
-0.7
+0.8
+0.2
nitrogen source
L-Arginine (N)
+0.2
N.D.
-0.2
+1.1
+0.3
nitrogen source
L-Proline (N)
+0.1
N.D.
+0.2
+1.4
+0.5
carbon source
D-Galactose (C)
+0.1
N.D.
-0.6
+1.9
+1.0
stress
Thallium(I) acetate 0.016 mg/ml
-0.3
N.D.
+0.0
+3.1
+1.7
stress
Thallium(I) acetate 0.008 mg/ml
+0.0
N.D.
+0.1
+3.3
+1.7
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