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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS07930 and ABZR86_RS07935 are separated by 7 nucleotides
ABZR86_RS07935 and ABZR86_RS07940 are separated by 16 nucleotides
ABZR86_RS07940 and ABZR86_RS07945 are separated by 168 nucleotides
ABZR86_RS07945 and ABZR86_RS07950 are separated by 381 nucleotides
ABZR86_RS07930: ABZR86_RS07930 - phosphatase PAP2 family protein, at 1,761,342 to 1,761,914
_RS07930
ABZR86_RS07935: ABZR86_RS07935 - 4'-phosphopantetheinyl transferase superfamily protein, at 1,761,922 to 1,762,608
_RS07935
ABZR86_RS07940: ABZR86_RS07940 - TetR/AcrR family transcriptional regulator, at 1,762,625 to 1,763,428
_RS07940
ABZR86_RS07945: ABZR86_RS07945 - hypothetical protein, at 1,763,597 to 1,764,511
_RS07945
ABZR86_RS07950: ABZR86_RS07950 - hypothetical protein, at 1,764,893 to 1,765,402
_RS07950
Group
Condition
ABZR86
_RS07930
ABZR86
_RS07935
ABZR86
_RS07940
ABZR86
_RS07945
ABZR86
_RS07950
nitrogen source
L-Asparagine (N)
-1.1
+0.3
-0.2
-0.2
-0.3
stress
Thallium(I) acetate 0.008 mg/ml
-1.4
+0.1
+0.2
-0.1
-0.1
nitrogen source
L-Arginine (N)
-0.4
+0.1
-0.3
-0.0
-0.8
stress
Fusidic 0.2 mg/ml
-0.8
-0.0
-0.1
-0.1
-0.4
stress
Nalidixic 0.08 mg/ml
-0.4
+0.0
-0.6
+0.2
-0.6
nitrogen source
L-Leucine (N)
-0.4
-0.3
-0.2
-0.2
-0.3
lb
LB
-0.2
-0.4
-0.3
+0.2
-0.3
stress
Zinc 2.5 mM
+0.5
-0.0
-0.8
+0.1
-0.6
stress
Fusidic 0.4 mg/ml
-0.2
+0.1
-0.2
-0.2
-0.4
stress
Dimethyl Sulfoxide 7.5 vol%
+0.1
+0.2
-0.5
-0.2
-0.4
stress
Spectinomycin 0.04 mg/ml
-0.1
-0.2
+0.2
-0.0
-0.6
carbon source
L-Alanine (C)
-0.5
-0.1
-0.2
-0.1
+0.2
carbon source
D-Fructose (C)
-0.7
-0.3
+0.3
-0.2
+0.2
carbon source
pyruvate (C)
-0.3
-0.5
+0.4
-0.4
+0.2
stress
Chloramphenicol 0.008 mg/ml
-0.6
+0.1
-0.4
+0.0
+0.4
carbon source
NAG (C)
-0.3
+0.1
+0.0
-0.4
+0.3
carbon source
D-Fructose (C)
-1.3
+0.4
+0.6
+0.4
-0.4
stress
nitrate 200 mM
-0.6
+0.3
+0.1
+0.0
-0.1
carbon source
D-Cellobiose (C)
+0.1
+0.2
+0.1
+0.1
-0.6
stress
Nalidixic 0.04 mg/ml
-0.5
-0.2
+0.3
+0.3
+0.0
stress
Tetracycline 0.012 mg/ml
-0.2
-0.1
+0.3
+0.2
-0.3
stress
Tetracycline 0.024 mg/ml
-0.1
+0.5
-0.2
+0.2
-0.4
carbon source
L-Proline (C)
-0.5
-0.0
+0.6
-0.2
+0.1
carbon source
D-Maltose (C)
+0.0
-0.5
+0.3
-0.1
+0.4
stress
sodium fluoride 40 mM
-0.4
+0.4
-0.2
+0.0
+0.2
carbon source
a-Cyclodextrin (C)
+0.4
+0.2
-0.6
+0.2
-0.2
carbon source
D-Cellobiose (C)
-0.3
-0.3
+0.5
-0.1
+0.2
stress
Carbenicillin 0.02 mg/ml
-0.7
+0.1
+0.6
-0.0
+0.2
stress
Carbenicillin 0.04 mg/ml
-0.5
+0.2
+0.2
+0.1
+0.1
stress
perchlorate 75 mM
-0.1
+0.2
+0.5
+0.0
-0.3
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ABZR86_RS07940
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