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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS07880 and ABZR86_RS07885 are separated by 103 nucleotides
ABZR86_RS07885 and ABZR86_RS07890 are separated by 49 nucleotides
ABZR86_RS07890 and ABZR86_RS07895 are separated by 124 nucleotides
ABZR86_RS07895 and ABZR86_RS07900 are separated by 104 nucleotides
ABZR86_RS07880: ABZR86_RS07880 - 30S ribosomal protein THX, at 1,752,514 to 1,752,678
_RS07880
ABZR86_RS07885: ABZR86_RS07885 - cation diffusion facilitator family transporter, at 1,752,782 to 1,753,765
_RS07885
ABZR86_RS07890: ABZR86_RS07890 - MerC domain-containing protein, at 1,753,815 to 1,754,237
_RS07890
ABZR86_RS07895: ABZR86_RS07895 - TonB-dependent receptor, at 1,754,362 to 1,756,362
_RS07895
ABZR86_RS07900: ABZR86_RS07900 - transcriptional repressor, at 1,756,467 to 1,756,949
_RS07900
Group
Condition
ABZR86
_RS07880
ABZR86
_RS07885
ABZR86
_RS07890
ABZR86
_RS07895
ABZR86
_RS07900
stress
Zinc 2.5 mM
-0.1
-5.7
N.D.
+0.8
-2.7
nitrogen source
L-Asparagine (N)
-0.7
-1.1
N.D.
-0.2
-3.8
carbon source
L-Alanine (C)
-0.1
-3.4
N.D.
-0.0
-0.4
carbon source
L-Alanine (C)
+0.2
-3.0
N.D.
+0.1
-0.7
carbon source
D-Galactose (C)
-0.2
-3.2
N.D.
+0.0
+0.7
carbon source
D-Fructose (C)
-0.6
-2.8
N.D.
+0.3
+0.8
carbon source
D-Fructose (C)
+0.2
-2.4
N.D.
+0.1
-0.0
stress
Chlorite 0.32 mM
-0.9
-0.0
N.D.
+0.0
-0.9
nitrogen source
nitrate (N)
-0.3
-1.8
N.D.
+0.1
+0.2
stress
Sisomicin 0.016 mg/ml
-0.1
-0.1
N.D.
+0.0
-1.2
nitrogen source
L-Proline (N)
-0.3
-0.5
N.D.
+0.1
-0.5
nitrogen source
Glucuronamide (N)
-0.1
-1.7
N.D.
+0.2
+0.5
nitrogen source
N-Acetyl-D-glucosamine (N)
+0.2
-1.5
N.D.
+0.0
+0.2
stress
D-Cycloserine 0.032 mg/ml
+0.1
-1.1
N.D.
+0.1
+0.2
carbon source
a-Cyclodextrin (C)
+0.1
-1.8
N.D.
+0.2
+0.8
stress
Fusidic 0.4 mg/ml
-0.2
+0.5
N.D.
-0.1
-0.9
carbon source
a-Cyclodextrin (C)
-0.1
-1.6
N.D.
+0.2
+0.9
carbon source
NAG (C)
-0.2
-1.3
N.D.
+0.3
+0.6
carbon source
NAG (C)
+0.1
-1.1
N.D.
-0.0
+0.5
carbon source
D-Maltose (C)
+0.2
-1.4
N.D.
+0.2
+0.6
carbon source
D-Cellobiose (C)
+0.3
-0.9
N.D.
-0.0
+0.2
carbon source
L-Proline (C)
+0.3
-0.9
N.D.
-0.1
+0.4
nitrogen source
D-Glucosamine Hydrochloride (N)
+0.1
-1.8
N.D.
+0.1
+1.4
carbon source
L-Proline (C)
+0.1
-0.7
N.D.
-0.0
+0.6
carbon source
pyruvate (C)
-0.3
-0.4
N.D.
-0.0
+1.1
nitrogen source
L-Isoleucine (N)
-0.6
-0.2
N.D.
+0.0
+1.2
carbon source
D-Glucose (C)
+0.2
-0.7
N.D.
+0.1
+0.9
nitrogen source
L-Lysine (N)
+0.0
-0.4
N.D.
-0.1
+1.0
carbon source
pyruvate (C)
-0.4
-0.5
N.D.
-0.0
+1.7
stress
Tetracycline 0.024 mg/ml
-0.4
+0.2
N.D.
+0.2
+0.9
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