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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS07520 and ABZR86_RS07525 are separated by 46 nucleotides
ABZR86_RS07525 and ABZR86_RS07530 are separated by 8 nucleotides
ABZR86_RS07530 and ABZR86_RS07535 are separated by 5 nucleotides
ABZR86_RS07535 and ABZR86_RS07540 are separated by 171 nucleotides
ABZR86_RS07520: ABZR86_RS07520 - thiamine pyrophosphate-dependent enzyme, at 1,657,361 to 1,659,628
_RS07520
ABZR86_RS07525: ABZR86_RS07525 - hypothetical protein, at 1,659,675 to 1,660,151
_RS07525
ABZR86_RS07530: ABZR86_RS07530 - GNAT family N-acetyltransferase, at 1,660,160 to 1,660,720
_RS07530
ABZR86_RS07535: ABZR86_RS07535 - acyl-CoA dehydrogenase family protein, at 1,660,726 to 1,661,895
_RS07535
ABZR86_RS07540: ABZR86_RS07540 - DMT family transporter, at 1,662,067 to 1,662,942
_RS07540
Group
Condition
ABZR86
_RS07520
ABZR86
_RS07525
ABZR86
_RS07530
ABZR86
_RS07535
ABZR86
_RS07540
stress
Sisomicin 0.016 mg/ml
-1.2
-0.2
+0.1
-0.5
-0.1
stress
Spectinomycin 0.04 mg/ml
-0.4
-0.3
-0.3
-0.7
+0.1
carbon source
NAG (C)
-0.2
-0.3
-0.7
+0.2
-0.1
carbon source
L-Alanine (C)
-0.1
-0.3
-0.2
-0.5
+0.0
stress
Tetracycline 0.024 mg/ml
-0.3
+0.3
-0.4
-0.5
-0.1
carbon source
pyruvate (C)
-0.1
-0.0
-0.4
-0.2
-0.2
carbon source
L-Alanine (C)
-0.2
-0.2
+0.1
-0.4
-0.2
stress
Paraquat dichloride 0.1 mg/ml
-0.1
-0.1
+0.4
-1.0
-0.1
nitrogen source
L-Asparagine (N)
-0.3
+0.1
+0.0
-0.2
-0.4
carbon source
D-Cellobiose (C)
-0.1
-0.1
-0.6
+0.1
-0.1
stress
Paraquat dichloride 0.2 mg/ml
-0.2
+0.2
-0.2
-0.5
+0.1
stress
Tetracycline 0.012 mg/ml
-0.0
+0.0
+0.1
-0.4
-0.2
carbon source
L-Proline (C)
-0.0
-0.1
-0.2
+0.4
-0.2
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.3
+0.0
-0.1
+0.6
-0.2
nitrogen source
L-Lysine (N)
-0.2
+0.4
+0.1
-0.7
+0.5
stress
Fusidic 0.4 mg/ml
+0.1
-0.1
+0.4
-0.0
-0.3
nitrogen source
L-Isoleucine (N)
+0.0
-0.2
+0.2
+0.3
-0.2
carbon source
NAG (C)
-0.1
-0.2
+0.1
+0.4
+0.1
stress
Dimethyl Sulfoxide 7.5 vol%
+0.1
+0.1
+0.2
-0.4
+0.2
carbon source
D-Fructose (C)
+0.0
-0.2
+0.6
+0.1
-0.2
lb
LB
+0.1
-0.3
+0.2
+0.0
+0.5
nitrogen source
nitrate (N)
-0.0
+0.1
-0.2
+0.4
+0.3
nitrogen source
N-Acetyl-D-glucosamine (N)
-0.0
+0.1
+0.2
+0.7
-0.4
stress
Nalidixic 0.02 mg/ml
+0.1
+0.1
+0.3
+0.4
-0.3
stress
sodium fluoride 60 mM
-0.1
+0.1
+0.6
+0.1
+0.0
stress
Nalidixic 0.01 mg/ml
+0.2
+0.2
+0.2
+0.3
+0.1
carbon source
D-Galactose (C)
-0.2
-0.0
-0.1
+2.3
-1.1
lb
LB
+0.4
+0.2
+0.1
-0.1
+0.4
stress
Thallium(I) acetate 0.016 mg/ml
+0.3
+0.4
+0.5
-0.3
+0.2
stress
Cisplatin 0.0032 mg/ml
-0.2
+0.2
+0.1
-0.1
+1.0
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