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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS06905 and ABZR86_RS06910 are separated by 1206 nucleotides
ABZR86_RS06910 and ABZR86_RS06915 are separated by 193 nucleotides
ABZR86_RS06915 and ABZR86_RS06920 are separated by 115 nucleotides
ABZR86_RS06920 and ABZR86_RS06925 are separated by 88 nucleotides
ABZR86_RS06905: ABZR86_RS06905 - hypothetical protein, at 1,516,572 to 1,522,394
_RS06905
ABZR86_RS06910: ABZR86_RS06910 - hypothetical protein, at 1,523,601 to 1,524,083
_RS06910
ABZR86_RS06915: ABZR86_RS06915 - hypothetical protein, at 1,524,277 to 1,524,645
_RS06915
ABZR86_RS06920: ABZR86_RS06920 - hypothetical protein, at 1,524,761 to 1,525,222
_RS06920
ABZR86_RS06925: ABZR86_RS06925 - dihydrofolate reductase family protein, at 1,525,311 to 1,525,880
_RS06925
Group
Condition
ABZR86
_RS06905
ABZR86
_RS06910
ABZR86
_RS06915
ABZR86
_RS06920
ABZR86
_RS06925
stress
Nalidixic 0.08 mg/ml
-0.0
-0.4
+0.1
-0.2
-0.2
stress
Zinc 2.5 mM
-0.0
-0.2
-0.2
+0.0
-0.2
nitrogen source
L-Arginine (N)
+0.0
-0.3
+0.2
-0.3
+0.1
stress
Spectinomycin 0.04 mg/ml
+0.1
-0.4
+0.2
+0.2
-0.0
nitrogen source
N-Acetyl-D-glucosamine (N)
+0.1
-0.4
+0.3
+0.0
-0.0
stress
Sisomicin 0.016 mg/ml
+0.0
-0.2
+0.2
+0.3
-0.2
carbon source
L-Proline (C)
+0.0
+0.4
-0.3
-0.0
+0.2
stress
sodium fluoride 60 mM
-0.0
-0.1
+0.2
+0.1
+0.2
stress
A22 0.01 mg/ml
+0.0
+0.2
+0.3
-0.1
-0.0
stress
D-Cycloserine 0.032 mg/ml
+0.0
+0.2
-0.1
+0.1
+0.2
stress
sodium fluoride 40 mM
-0.0
+0.7
-0.1
-0.1
-0.1
stress
Thallium(I) acetate 0.016 mg/ml
+0.1
+0.2
+0.2
+0.2
-0.1
carbon source
D-Galactose (C)
-0.0
+0.3
-0.1
+0.1
+0.2
carbon source
a-Cyclodextrin (C)
+0.1
+0.4
-0.1
+0.1
-0.1
lb
LB
+0.0
+0.4
-0.1
+0.2
-0.0
carbon source
D-Fructose (C)
+0.1
+0.6
-0.3
+0.1
+0.1
carbon source
D-Maltose (C)
+0.1
+0.4
+0.1
+0.1
-0.1
nitrogen source
L-Lysine (N)
+0.0
-0.3
+0.5
+0.2
+0.2
nitrogen source
Glucuronamide (N)
+0.0
-0.1
+0.3
+0.3
+0.1
carbon source
D-Maltose (C)
+0.1
+0.2
-0.2
+0.4
+0.2
carbon source
NAG (C)
+0.2
+0.3
-0.2
+0.2
+0.2
carbon source
pyruvate (C)
+0.1
+0.2
-0.0
+0.3
+0.2
carbon source
D-Cellobiose (C)
+0.1
+0.2
+0.2
+0.3
+0.0
stress
nitrite 6 mM
-0.0
+0.5
+0.2
+0.2
+0.0
carbon source
D-Fructose (C)
+0.1
+0.5
-0.1
+0.2
+0.2
carbon source
D-Glucose (C)
+0.1
+0.6
-0.0
+0.2
+0.1
nitrogen source
nitrate (N)
+0.0
+0.7
+0.1
+0.4
+0.0
lb
LB
+0.2
+0.5
+0.2
+0.3
+0.3
nitrogen source
L-Asparagine (N)
+0.1
+0.7
+0.6
+0.2
-0.1
stress
Ceftazidime 0.1 mg/ml
+0.2
+0.5
+0.2
+0.3
+0.4
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