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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS06795 and ABZR86_RS06800 are separated by 2 nucleotides
ABZR86_RS06800 and ABZR86_RS06805 are separated by 113 nucleotides
ABZR86_RS06805 and ABZR86_RS06810 are separated by 119 nucleotides
ABZR86_RS06810 and ABZR86_RS06815 are separated by 162 nucleotides
ABZR86_RS06795: ABZR86_RS06795 - GNAT family N-acetyltransferase, at 1,494,361 to 1,494,957
_RS06795
ABZR86_RS06800: ABZR86_RS06800 - ketosteroid isomerase-related protein, at 1,494,960 to 1,495,364
_RS06800
ABZR86_RS06805: ABZR86_RS06805 - acetyl-CoA hydrolase/transferase C-terminal domain-containing protein, at 1,495,478 to 1,497,427
_RS06805
ABZR86_RS06810: ABZR86_RS06810 - phospholipase D-like domain-containing protein, at 1,497,547 to 1,499,019
_RS06810
ABZR86_RS06815: ABZR86_RS06815 - exodeoxyribonuclease VII large subunit, at 1,499,182 to 1,500,531
_RS06815
Group
Condition
ABZR86
_RS06795
ABZR86
_RS06800
ABZR86
_RS06805
ABZR86
_RS06810
ABZR86
_RS06815
stress
Nalidixic 0.04 mg/ml
-0.1
-0.3
+0.0
-0.0
-3.4
stress
Nalidixic 0.02 mg/ml
-0.1
-0.1
+0.0
+0.0
-3.2
stress
Nalidixic 0.01 mg/ml
-0.1
+0.1
-0.0
-0.0
-3.3
stress
Nalidixic 0.08 mg/ml
-0.0
-0.2
-0.2
-0.1
-2.4
stress
Ceftazidime 0.05 mg/ml
-0.1
-0.2
-0.1
-0.0
-0.6
nitrogen source
N-Acetyl-D-glucosamine (N)
+0.0
-0.5
-0.0
-0.1
-0.3
stress
Chlorite 0.32 mM
+0.0
+0.1
+0.1
-0.8
-0.3
stress
Fusidic 0.2 mg/ml
-0.3
-0.2
-0.1
-0.2
+0.1
stress
Tetracycline 0.024 mg/ml
-0.2
-0.0
+0.1
-0.5
+0.0
carbon source
NAG (C)
-0.1
-0.1
-0.1
-0.1
-0.2
nitrogen source
L-Asparagine (N)
+0.0
-0.3
-0.2
+0.1
-0.2
stress
Chloride 250 mM
-0.1
-0.0
-0.0
-0.3
-0.2
stress
nitrate 200 mM
-0.2
+0.1
-0.0
-0.1
-0.3
stress
D-Cycloserine 0.032 mg/ml
+0.0
+0.2
-0.0
+0.1
-0.7
nitrogen source
L-Proline (N)
-0.2
+0.1
-0.2
-0.1
-0.1
stress
Carbenicillin 0.02 mg/ml
-0.0
+0.1
-0.0
-0.1
-0.4
stress
Chloramphenicol 0.012 mg/ml
-0.3
-0.1
+0.1
-0.1
+0.1
stress
Sisomicin 0.016 mg/ml
+0.0
+0.2
+0.0
-0.2
-0.4
lb
LB
+0.1
+0.2
-0.1
-0.1
-0.2
stress
Fusidic 0.4 mg/ml
+0.0
+0.2
+0.1
-0.3
-0.1
stress
Spectinomycin 0.04 mg/ml
+0.1
+0.5
-0.3
+0.0
-0.2
nitrogen source
L-Lysine (N)
-0.1
+0.3
+0.1
-0.1
-0.1
carbon source
D-Fructose (C)
+0.1
+0.2
+0.2
-0.2
-0.0
carbon source
D-Fructose (C)
+0.1
+0.2
+0.4
-0.1
-0.3
stress
Paraquat dichloride 0.05 mg/ml
+0.1
+0.3
+0.1
+0.0
-0.2
carbon source
L-Alanine (C)
+0.1
-0.1
+0.4
-0.1
+0.1
carbon source
L-Alanine (C)
+0.1
-0.0
+0.3
-0.1
+0.2
lb
LB
+0.1
+0.5
-0.1
-0.0
+0.0
carbon source
D-Cellobiose (C)
+0.1
+0.4
+0.1
+0.0
-0.0
carbon source
NAG (C)
+0.1
+0.3
+0.2
-0.1
+0.1
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