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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS06690 and ABZR86_RS06695 are separated by 19 nucleotides
ABZR86_RS06695 and ABZR86_RS06700 are separated by 165 nucleotides
ABZR86_RS06700 and ABZR86_RS06705 are separated by 12 nucleotides
ABZR86_RS06705 and ABZR86_RS06710 overlap by 7 nucleotides
ABZR86_RS06690: ABZR86_RS06690 - acireductone synthase, at 1,474,219 to 1,474,905
_RS06690
ABZR86_RS06695: ABZR86_RS06695 - C13 family peptidase, at 1,474,925 to 1,475,959
_RS06695
ABZR86_RS06700: ABZR86_RS06700 - bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE, at 1,476,125 to 1,476,754
_RS06700
ABZR86_RS06705: ABZR86_RS06705 - imidazole glycerol phosphate synthase subunit HisF, at 1,476,767 to 1,477,537
_RS06705
ABZR86_RS06710: ABZR86_RS06710 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase, at 1,477,531 to 1,478,259
_RS06710
Group
Condition
ABZR86
_RS06690
ABZR86
_RS06695
ABZR86
_RS06700
ABZR86
_RS06705
ABZR86
_RS06710
carbon source
D-Fructose (C)
-0.5
-0.3
-5.9
-5.6
-6.1
carbon source
a-Cyclodextrin (C)
-0.8
-0.1
-6.2
-5.8
-5.3
carbon source
D-Galactose (C)
-0.9
-0.2
-5.3
-5.8
-6.0
carbon source
a-Cyclodextrin (C)
-1.2
-0.2
-5.1
-6.5
-5.0
carbon source
D-Glucose (C)
-0.7
-0.1
-6.9
-5.2
-4.9
carbon source
D-Maltose (C)
-0.8
-0.3
-4.9
-5.6
-6.1
nitrogen source
D-Glucosamine Hydrochloride (N)
-1.5
-0.1
-4.0
-6.9
-5.1
carbon source
D-Cellobiose (C)
-0.8
+0.0
-4.5
-5.2
-6.1
nitrogen source
L-Leucine (N)
-0.0
-0.1
-5.4
-6.7
-4.2
carbon source
D-Maltose (C)
-0.6
+0.0
-4.9
-4.1
-6.3
carbon source
NAG (C)
-1.0
-0.2
-4.8
-3.4
-6.2
carbon source
NAG (C)
-0.9
-0.3
-4.6
-4.1
-5.2
nitrogen source
N-Acetyl-D-glucosamine (N)
-0.8
-0.0
-3.6
-6.1
-4.2
carbon source
D-Glucose (C)
-1.5
+0.0
-4.0
-4.5
-4.3
carbon source
D-Cellobiose (C)
-0.7
-0.3
-4.3
-3.7
-4.9
carbon source
L-Proline (C)
-0.5
-0.1
-4.6
-4.6
-3.6
carbon source
L-Alanine (C)
-0.8
-0.1
-3.7
-4.4
-4.3
carbon source
L-Proline (C)
-0.3
-0.2
-4.4
-4.1
-4.3
carbon source
L-Alanine (C)
-1.0
-0.2
-4.8
-3.0
-3.9
carbon source
pyruvate (C)
-0.7
+0.0
-3.7
-4.2
-3.6
nitrogen source
nitrate (N)
-2.2
+0.1
-4.5
-2.5
-2.8
nitrogen source
Glucuronamide (N)
-1.0
-0.2
-3.0
-4.1
-3.6
carbon source
D-Fructose (C)
-1.0
-0.0
-4.1
-2.7
-2.9
nitrogen source
L-Isoleucine (N)
-0.7
-0.3
-3.2
-3.3
-2.6
nitrogen source
L-Arginine (N)
-0.7
+0.1
-2.7
-3.4
-3.1
carbon source
pyruvate (C)
-0.8
-0.0
-2.6
-3.3
-2.7
nitrogen source
L-Proline (N)
-0.6
+0.0
-1.7
-1.7
-2.9
nitrogen source
L-Lysine (N)
-0.4
-0.1
-2.0
-1.1
-1.0
stress
Chlorite 0.32 mM
-3.9
-0.1
+0.2
-0.1
-0.5
lb
LB
-3.2
-0.2
-0.6
-0.2
+0.1
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