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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS06675 and ABZR86_RS06680 are separated by 174 nucleotides
ABZR86_RS06680 and ABZR86_RS06685 overlap by 4 nucleotides
ABZR86_RS06685 and ABZR86_RS06690 are separated by 71 nucleotides
ABZR86_RS06690 and ABZR86_RS06695 are separated by 19 nucleotides
ABZR86_RS06675: ABZR86_RS06675 - high-potential iron-sulfur protein, at 1,472,430 to 1,472,759
_RS06675
ABZR86_RS06680: ABZR86_RS06680 - methylthioribulose 1-phosphate dehydratase, at 1,472,934 to 1,473,581
_RS06680
ABZR86_RS06685: ABZR86_RS06685 - acireductone dioxygenase, at 1,473,578 to 1,474,147
_RS06685
ABZR86_RS06690: ABZR86_RS06690 - acireductone synthase, at 1,474,219 to 1,474,905
_RS06690
ABZR86_RS06695: ABZR86_RS06695 - C13 family peptidase, at 1,474,925 to 1,475,959
_RS06695
Group
Condition
ABZR86
_RS06675
ABZR86
_RS06680
ABZR86
_RS06685
ABZR86
_RS06690
ABZR86
_RS06695
carbon source
D-Galactose (C)
-0.4
-0.8
-2.7
-0.9
-0.2
stress
Chlorite 0.32 mM
-0.1
-0.2
-0.4
-3.9
-0.1
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.1
-0.4
-1.9
-1.5
-0.1
stress
Cisplatin 0.0032 mg/ml
+0.1
-0.1
-0.2
-3.4
-0.1
stress
Chloramphenicol 0.008 mg/ml
-0.3
+0.1
-0.3
-3.1
-0.0
nitrogen source
N-Acetyl-D-glucosamine (N)
-0.4
-0.3
-1.7
-0.8
-0.0
nitrogen source
nitrate (N)
-0.4
-0.2
-0.2
-2.2
+0.1
lb
LB
-0.3
+0.2
-0.0
-2.5
-0.0
carbon source
NAG (C)
-0.0
-0.4
-0.9
-0.9
-0.3
carbon source
NAG (C)
-0.1
-0.4
-0.9
-1.0
-0.2
lb
LB
+0.7
+0.0
+0.2
-3.2
-0.2
stress
Sisomicin 0.016 mg/ml
+0.4
-0.5
+0.0
-2.1
-0.1
stress
D-Cycloserine 0.032 mg/ml
-0.2
-0.1
-0.3
-1.4
+0.0
stress
Fusidic 0.2 mg/ml
-0.1
-0.3
-0.1
-1.5
+0.0
carbon source
D-Cellobiose (C)
-0.2
-0.4
-0.4
-0.7
-0.3
carbon source
a-Cyclodextrin (C)
+0.0
-0.2
-0.3
-1.2
-0.2
carbon source
D-Glucose (C)
+0.3
-0.3
-0.2
-1.5
+0.0
carbon source
D-Glucose (C)
-0.3
-0.2
-0.5
-0.7
-0.1
stress
Fusidic 0.4 mg/ml
-0.7
-0.5
+0.1
-0.7
+0.2
lb
LB
+0.0
+0.1
-0.5
-1.1
-0.0
stress
Spectinomycin 0.04 mg/ml
+0.6
+0.3
-0.4
-2.0
+0.1
stress
Chloramphenicol 0.012 mg/ml
-0.4
-0.1
+0.2
-1.0
+0.0
stress
nitrate 150 mM
-0.1
+0.2
+0.0
-1.4
-0.1
stress
Zinc 2.5 mM
+0.3
+0.3
+0.0
-0.9
-0.3
carbon source
L-Alanine (C)
+0.4
+0.3
+0.4
-1.0
-0.2
stress
Nalidixic 0.02 mg/ml
-0.5
-0.1
+0.2
+1.2
-0.1
stress
Nalidixic 0.01 mg/ml
-0.2
-0.2
+0.4
+1.2
-0.0
nitrogen source
L-Asparagine (N)
+0.9
-0.4
-0.0
+0.5
+0.3
stress
Nalidixic 0.04 mg/ml
-0.5
-0.3
+0.3
+2.2
+0.0
stress
Nalidixic 0.08 mg/ml
+0.2
-0.1
-0.0
+1.6
+0.0
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