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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS06150 and ABZR86_RS06155 overlap by 1 nucleotides
ABZR86_RS06155 and ABZR86_RS06160 are separated by 7 nucleotides
ABZR86_RS06160 and ABZR86_RS06165 are separated by 217 nucleotides
ABZR86_RS06165 and ABZR86_RS06170 are separated by 399 nucleotides
ABZR86_RS06150: ABZR86_RS06150 - aminodeoxychorismate lyase, at 1,379,438 to 1,380,256
_RS06150
ABZR86_RS06155: ABZR86_RS06155 - aminodeoxychorismate synthase component I, at 1,380,256 to 1,381,605
_RS06155
ABZR86_RS06160: ABZR86_RS06160 - beta-ketoacyl-ACP synthase II, at 1,381,613 to 1,382,851
_RS06160
ABZR86_RS06165: ABZR86_RS06165 - acyl carrier protein, at 1,383,069 to 1,383,308
_RS06165
ABZR86_RS06170: ABZR86_RS06170 - 3-oxoacyl-ACP reductase FabG, at 1,383,708 to 1,384,451
_RS06170
Group
Condition
ABZR86
_RS06150
ABZR86
_RS06155
ABZR86
_RS06160
ABZR86
_RS06165
ABZR86
_RS06170
nitrogen source
Casamino Acids (N)
-0.5
-0.1
N.D.
N.D.
N.D.
stress
A22 0.01 mg/ml
-0.4
-0.2
N.D.
N.D.
N.D.
stress
sodium fluoride 40 mM
-0.2
-0.2
N.D.
N.D.
N.D.
nitrogen source
Glucuronamide (N)
-0.5
+0.1
N.D.
N.D.
N.D.
nitrogen source
L-Isoleucine (N)
-0.5
+0.1
N.D.
N.D.
N.D.
stress
Nalidixic 0.08 mg/ml
-0.4
+0.1
N.D.
N.D.
N.D.
stress
Thallium(I) acetate 0.008 mg/ml
-0.3
-0.1
N.D.
N.D.
N.D.
lb
LB
-0.3
+0.0
N.D.
N.D.
N.D.
stress
Nalidixic 0.02 mg/ml
-0.2
-0.1
N.D.
N.D.
N.D.
nitrogen source
nitrate (N)
-0.2
-0.1
N.D.
N.D.
N.D.
lb
LB
-0.3
+0.0
N.D.
N.D.
N.D.
stress
Spectinomycin 0.04 mg/ml
-0.3
+0.1
N.D.
N.D.
N.D.
carbon source
D-Maltose (C)
+0.1
-0.3
N.D.
N.D.
N.D.
lb
LB
+0.1
-0.2
N.D.
N.D.
N.D.
carbon source
D-Galactose (C)
-0.2
+0.1
N.D.
N.D.
N.D.
stress
Paraquat dichloride 0.2 mg/ml
-0.2
+0.1
N.D.
N.D.
N.D.
stress
Tetracycline 0.024 mg/ml
+0.2
-0.2
N.D.
N.D.
N.D.
carbon source
a-Cyclodextrin (C)
-0.2
+0.1
N.D.
N.D.
N.D.
stress
Chloramphenicol 0.012 mg/ml
+0.2
-0.1
N.D.
N.D.
N.D.
lb
LB
+0.3
-0.1
N.D.
N.D.
N.D.
stress
Nalidixic 0.04 mg/ml
+0.3
-0.1
N.D.
N.D.
N.D.
carbon source
D-Fructose (C)
+0.2
-0.0
N.D.
N.D.
N.D.
stress
Fusidic 0.4 mg/ml
+0.3
-0.1
N.D.
N.D.
N.D.
stress
Sisomicin 0.016 mg/ml
+0.3
-0.1
N.D.
N.D.
N.D.
nitrogen source
L-Asparagine (N)
+0.1
+0.2
N.D.
N.D.
N.D.
stress
sodium fluoride 60 mM
+0.3
+0.0
N.D.
N.D.
N.D.
nitrogen source
N-Acetyl-D-glucosamine (N)
+0.2
+0.1
N.D.
N.D.
N.D.
carbon source
L-Alanine (C)
+0.3
-0.0
N.D.
N.D.
N.D.
carbon source
pyruvate (C)
+0.2
+0.1
N.D.
N.D.
N.D.
nitrogen source
L-Leucine (N)
+0.4
-0.0
N.D.
N.D.
N.D.
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