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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS05835 and ABZR86_RS05840 are separated by 211 nucleotides
ABZR86_RS05840 and ABZR86_RS05845 are separated by 32 nucleotides
ABZR86_RS05845 and ABZR86_RS05850 are separated by 107 nucleotides
ABZR86_RS05850 and ABZR86_RS05855 are separated by 228 nucleotides
ABZR86_RS05835: ABZR86_RS05835 - hypothetical protein, at 1,309,602 to 1,310,285
_RS05835
ABZR86_RS05840: ABZR86_RS05840 - serine hydrolase domain-containing protein, at 1,310,497 to 1,311,744
_RS05840
ABZR86_RS05845: ABZR86_RS05845 - DUF2884 family protein, at 1,311,777 to 1,312,322
_RS05845
ABZR86_RS05850: ABZR86_RS05850 - dihydrofolate reductase family protein, at 1,312,430 to 1,313,011
_RS05850
ABZR86_RS05855: ABZR86_RS05855 - class II fumarate hydratase, at 1,313,240 to 1,314,637
_RS05855
Group
Condition
ABZR86
_RS05835
ABZR86
_RS05840
ABZR86
_RS05845
ABZR86
_RS05850
ABZR86
_RS05855
stress
Spectinomycin 0.04 mg/ml
-1.8
+0.0
+0.2
-0.2
-0.3
stress
Paraquat dichloride 0.2 mg/ml
-1.3
-0.0
-0.2
-0.2
+0.1
stress
Nalidixic 0.01 mg/ml
-0.4
-0.1
-0.1
-0.1
-0.1
lb
LB
-1.5
+0.2
+0.1
+0.2
+0.2
stress
Fusidic 0.2 mg/ml
-0.8
+0.3
+0.1
+0.1
-0.2
stress
sodium fluoride 40 mM
-1.1
+0.3
+0.2
+0.1
+0.0
nitrogen source
L-Lysine (N)
-0.5
+0.0
+0.1
-0.4
+0.2
stress
Tetracycline 0.012 mg/ml
-0.7
+0.1
+0.2
+0.3
-0.1
lb
LB
+0.3
-0.1
+0.3
-0.7
+0.1
stress
Thallium(I) acetate 0.016 mg/ml
+0.3
-0.1
+0.3
-0.3
-0.3
carbon source
D-Glucose (C)
-0.5
+0.0
-0.0
+0.3
+0.2
stress
Tetracycline 0.024 mg/ml
+0.2
-0.2
-0.1
+0.2
-0.1
lb
LB
+0.4
+0.1
+0.2
-0.6
-0.1
stress
Chlorite 0.32 mM
-0.4
+0.1
+0.3
+0.0
+0.2
stress
Carbenicillin 0.02 mg/ml
+0.8
+0.1
-0.0
-0.4
+0.0
stress
A22 0.01 mg/ml
+0.7
+0.1
-0.2
+0.0
-0.1
carbon source
D-Galactose (C)
+0.1
-0.1
-0.1
+0.5
+0.3
carbon source
L-Proline (C)
+0.6
+0.1
-0.2
+0.2
+0.2
stress
Fusidic 0.4 mg/ml
+0.7
+0.2
+0.1
-0.1
+0.1
nitrogen source
N-Acetyl-D-glucosamine (N)
+0.7
+0.1
+0.1
+0.1
-0.0
carbon source
D-Maltose (C)
+0.2
+0.0
-0.0
+0.6
+0.2
stress
Zinc 2.5 mM
+0.9
+0.3
+0.0
+0.1
-0.2
nitrogen source
L-Proline (N)
+0.9
+0.0
+0.2
+0.0
+0.1
carbon source
D-Fructose (C)
+0.7
+0.2
-0.1
+0.2
+0.2
lb
LB
+0.9
+0.2
-0.0
+0.2
-0.0
carbon source
D-Cellobiose (C)
+0.9
+0.0
+0.0
+0.2
+0.1
carbon source
D-Fructose (C)
+0.9
+0.2
+0.0
+0.3
-0.1
carbon source
a-Cyclodextrin (C)
+0.6
+0.1
+0.1
+0.4
+0.2
stress
D-Cycloserine 0.032 mg/ml
-0.0
-0.0
-0.1
+0.1
+1.5
nitrogen source
L-Asparagine (N)
+1.1
+0.6
+0.5
+0.2
-0.2
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