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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS05330 and ABZR86_RS05335 are separated by 275 nucleotides
ABZR86_RS05335 and ABZR86_RS05340 are separated by 195 nucleotides
ABZR86_RS05340 and ABZR86_RS05345 overlap by 4 nucleotides
ABZR86_RS05345 and ABZR86_RS05350 are separated by 166 nucleotides
ABZR86_RS05330: ABZR86_RS05330 - AarF/UbiB family protein, at 1,198,105 to 1,199,748
_RS05330
ABZR86_RS05335: ABZR86_RS05335 - hemerythrin domain-containing protein, at 1,200,024 to 1,200,515
_RS05335
ABZR86_RS05340: ABZR86_RS05340 - HAD family hydrolase, at 1,200,711 to 1,201,427
_RS05340
ABZR86_RS05345: ABZR86_RS05345 - NAD-dependent protein deacetylase, at 1,201,424 to 1,202,266
_RS05345
ABZR86_RS05350: ABZR86_RS05350 - CHAD domain-containing protein, at 1,202,433 to 1,203,344
_RS05350
Group
Condition
ABZR86
_RS05330
ABZR86
_RS05335
ABZR86
_RS05340
ABZR86
_RS05345
ABZR86
_RS05350
stress
Carbenicillin 0.02 mg/ml
-0.1
-1.8
-0.1
+0.0
+0.1
stress
nitrite 6 mM
-0.2
-1.6
+0.1
-0.0
-0.0
lb
LB
-0.2
-1.4
-0.0
+0.2
-0.1
carbon source
D-Fructose (C)
+0.2
-1.2
-0.1
-0.3
+0.1
nitrogen source
N-Acetyl-D-glucosamine (N)
-0.1
-1.0
-0.0
-0.0
-0.1
carbon source
D-Maltose (C)
-0.0
-1.0
-0.0
-0.0
-0.2
stress
Paraquat dichloride 0.2 mg/ml
-0.1
-0.9
-0.1
+0.1
-0.1
stress
Fusidic 0.4 mg/ml
-0.1
-0.5
-0.5
+0.1
+0.0
nitrogen source
L-Leucine (N)
-0.2
-0.8
+0.2
-0.2
+0.1
stress
Carbenicillin 0.04 mg/ml
+0.0
-0.8
-0.1
+0.0
+0.0
carbon source
D-Glucose (C)
-0.0
-0.9
+0.0
-0.0
+0.2
carbon source
D-Glucose (C)
+0.0
-0.8
-0.1
-0.0
+0.2
nitrogen source
L-Lysine (N)
-0.1
-0.3
-0.3
-0.1
+0.2
nitrogen source
nitrate (N)
+0.1
-0.6
-0.0
-0.0
-0.1
carbon source
D-Fructose (C)
-0.2
-0.5
+0.1
-0.2
+0.1
stress
Sisomicin 0.016 mg/ml
-0.1
-0.6
+0.2
-0.0
-0.0
stress
A22 0.01 mg/ml
-0.1
-0.4
+0.2
-0.1
-0.1
nitrogen source
Glucuronamide (N)
-0.1
-0.5
-0.0
+0.0
+0.2
carbon source
a-Cyclodextrin (C)
-0.2
+0.4
-0.0
-0.1
-0.1
stress
Nalidixic 0.08 mg/ml
+0.0
+0.6
-0.8
+0.4
-0.2
carbon source
NAG (C)
-0.2
+0.4
+0.0
+0.0
-0.2
stress
Cisplatin 0.0032 mg/ml
-0.0
+0.7
-0.1
+0.0
-0.1
lb
LB
+0.2
+0.8
-0.1
-0.1
-0.3
stress
Chlorite 0.32 mM
-0.1
+0.4
+0.2
+0.1
-0.1
stress
Thallium(I) acetate 0.016 mg/ml
+0.0
+0.8
+0.1
-0.2
+0.0
stress
Nalidixic 0.01 mg/ml
+0.0
+0.7
+0.2
-0.2
+0.2
lb
LB
+0.1
+1.0
-0.0
-0.0
-0.1
nitrogen source
L-Asparagine (N)
-0.0
+1.0
-0.1
-0.2
+0.2
stress
Tetracycline 0.024 mg/ml
+0.1
+1.0
-0.4
+0.0
+0.4
stress
Spectinomycin 0.04 mg/ml
+0.1
+1.1
+0.3
+0.1
-0.1
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