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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS05230 and ABZR86_RS05235 are separated by 92 nucleotides
ABZR86_RS05235 and ABZR86_RS05240 are separated by 43 nucleotides
ABZR86_RS05240 and ABZR86_RS05245 are separated by 211 nucleotides
ABZR86_RS05245 and ABZR86_RS05250 overlap by 32 nucleotides
ABZR86_RS05230: ABZR86_RS05230 - TetR family transcriptional regulator, at 1,178,805 to 1,179,437
_RS05230
ABZR86_RS05235: ABZR86_RS05235 - O-methyltransferase, at 1,179,530 to 1,180,186
_RS05235
ABZR86_RS05240: ABZR86_RS05240 - hypothetical protein, at 1,180,230 to 1,180,463
_RS05240
ABZR86_RS05245: ABZR86_RS05245 - cupin domain-containing protein, at 1,180,675 to 1,181,418
_RS05245
ABZR86_RS05250: ABZR86_RS05250 - hypothetical protein, at 1,181,387 to 1,182,085
_RS05250
Group
Condition
ABZR86
_RS05230
ABZR86
_RS05235
ABZR86
_RS05240
ABZR86
_RS05245
ABZR86
_RS05250
nitrogen source
L-Asparagine (N)
-1.0
+0.0
-0.4
-0.0
+0.1
stress
Nalidixic 0.04 mg/ml
-0.5
-0.1
+0.1
-0.2
-0.3
stress
Spectinomycin 0.04 mg/ml
-0.3
+0.2
-0.6
-0.1
-0.3
stress
Paraquat dichloride 0.05 mg/ml
-0.1
-0.1
-0.5
-0.1
-0.2
stress
Paraquat dichloride 0.1 mg/ml
+0.1
-0.2
-0.8
+0.1
-0.1
stress
Fusidic 0.4 mg/ml
+0.1
+0.2
-0.9
+0.1
-0.4
stress
Fusidic 0.2 mg/ml
+0.2
-0.1
-0.6
-0.2
-0.2
stress
Thallium(I) acetate 0.016 mg/ml
-0.0
-0.3
-0.7
+0.1
+0.1
stress
perchlorate 75 mM
-0.1
-0.2
-0.4
-0.0
+0.1
stress
nitrite 6 mM
-0.2
+0.1
-0.5
-0.0
+0.0
stress
Chloramphenicol 0.012 mg/ml
+0.2
-0.1
-0.2
-0.1
-0.3
stress
Ceftazidime 0.05 mg/ml
-0.0
-0.2
-0.5
+0.2
+0.1
stress
sodium fluoride 60 mM
-0.5
+0.1
+0.2
+0.1
-0.1
stress
Cisplatin 0.0032 mg/ml
-0.2
-0.3
+0.2
-0.0
+0.1
nitrogen source
nitrate (N)
+0.1
-0.1
-0.6
+0.0
+0.3
carbon source
D-Cellobiose (C)
-0.4
+0.1
-0.1
-0.0
+0.2
stress
Nalidixic 0.02 mg/ml
+0.2
+0.3
-0.5
+0.1
-0.2
carbon source
L-Alanine (C)
-0.0
+0.5
-0.2
-0.0
-0.3
stress
Zinc 2.5 mM
+0.2
-0.0
-0.4
+0.0
+0.1
stress
Carbenicillin 0.04 mg/ml
-0.3
-0.1
+0.5
-0.0
-0.2
nitrogen source
L-Isoleucine (N)
+0.6
-0.2
-0.2
+0.1
-0.2
nitrogen source
L-Leucine (N)
+0.2
+0.3
-0.1
-0.1
+0.0
carbon source
D-Fructose (C)
-0.3
+0.3
+0.2
+0.1
+0.0
stress
Tetracycline 0.024 mg/ml
+0.2
+0.5
-0.1
-0.1
-0.1
stress
Sisomicin 0.016 mg/ml
+0.2
+0.5
-0.5
+0.1
+0.1
carbon source
D-Fructose (C)
+0.6
+0.2
+0.0
-0.2
-0.3
lb
LB
+0.1
+0.1
-0.2
+0.2
+0.3
carbon source
NAG (C)
-0.1
+0.3
+0.3
-0.0
+0.1
carbon source
pyruvate (C)
+0.3
+0.2
-0.0
+0.2
-0.1
stress
Paraquat dichloride 0.2 mg/ml
+0.4
+0.3
+0.0
+0.1
+0.2
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ABZR86_RS05240
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