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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS05025 and ABZR86_RS05030 are separated by 160 nucleotides
ABZR86_RS05030 and ABZR86_RS05035 are separated by 132 nucleotides
ABZR86_RS05035 and ABZR86_RS05040 overlap by 4 nucleotides
ABZR86_RS05040 and ABZR86_RS05045 are separated by 11 nucleotides
ABZR86_RS05025: ABZR86_RS05025 - hypothetical protein, at 1,123,451 to 1,123,798
_RS05025
ABZR86_RS05030: ABZR86_RS05030 - filamentous haemagglutinin family protein, at 1,123,959 to 1,137,062
_RS05030
ABZR86_RS05035: ABZR86_RS05035 - hypothetical protein, at 1,137,195 to 1,137,542
_RS05035
ABZR86_RS05040: ABZR86_RS05040 - hypothetical protein, at 1,137,539 to 1,138,156
_RS05040
ABZR86_RS05045: ABZR86_RS05045 - putative porin, at 1,138,168 to 1,139,913
_RS05045
Group
Condition
ABZR86
_RS05025
ABZR86
_RS05030
ABZR86
_RS05035
ABZR86
_RS05040
ABZR86
_RS05045
nitrogen source
D-Glucosamine Hydrochloride (N)
N.D.
-0.0
-0.1
-0.3
-0.1
nitrogen source
L-Isoleucine (N)
N.D.
+0.0
-0.2
-0.2
-0.1
nitrogen source
nitrate (N)
N.D.
-0.0
+0.0
-0.4
+0.0
carbon source
D-Maltose (C)
N.D.
-0.0
-0.0
-0.2
-0.1
nitrogen source
L-Lysine (N)
N.D.
-0.1
-0.1
-0.1
-0.1
stress
Tetracycline 0.024 mg/ml
N.D.
-0.0
+0.1
-0.3
+0.0
carbon source
D-Galactose (C)
N.D.
-0.1
-0.1
-0.1
+0.1
stress
Chloride 250 mM
N.D.
-0.0
-0.0
-0.2
+0.1
carbon source
D-Cellobiose (C)
N.D.
+0.0
-0.1
+0.2
-0.3
stress
nitrite 6 mM
N.D.
+0.0
-0.0
-0.2
+0.1
stress
Thallium(I) acetate 0.016 mg/ml
N.D.
-0.0
-0.3
+0.1
+0.1
carbon source
D-Cellobiose (C)
N.D.
-0.0
-0.2
+0.1
-0.0
stress
Paraquat dichloride 0.2 mg/ml
N.D.
+0.0
-0.2
-0.1
+0.2
stress
Ceftazidime 0.05 mg/ml
N.D.
+0.0
-0.2
+0.0
+0.1
stress
Nalidixic 0.02 mg/ml
N.D.
-0.0
-0.2
+0.1
+0.1
nitrogen source
N-Acetyl-D-glucosamine (N)
N.D.
-0.0
-0.2
+0.1
+0.2
stress
Chloramphenicol 0.008 mg/ml
N.D.
+0.0
+0.1
-0.2
+0.2
carbon source
L-Proline (C)
N.D.
-0.0
+0.1
+0.1
-0.1
nitrogen source
Glucuronamide (N)
N.D.
+0.0
-0.3
+0.2
+0.2
stress
Carbenicillin 0.02 mg/ml
N.D.
+0.0
+0.2
-0.2
+0.1
stress
sodium fluoride 60 mM
N.D.
-0.0
-0.2
+0.4
+0.0
nitrogen source
L-Asparagine (N)
N.D.
+0.1
+0.6
-0.6
+0.1
stress
Ceftazidime 0.1 mg/ml
N.D.
+0.1
-0.1
+0.1
+0.1
carbon source
L-Alanine (C)
N.D.
-0.1
+0.2
+0.2
-0.1
lb
LB
N.D.
+0.1
+0.0
-0.1
+0.3
stress
Chlorite 0.32 mM
N.D.
+0.1
+0.1
-0.2
+0.3
stress
Thallium(I) acetate 0.008 mg/ml
N.D.
+0.1
+0.1
+0.1
+0.1
carbon source
D-Fructose (C)
N.D.
+0.0
-0.0
+0.2
+0.2
lb
LB
N.D.
+0.0
+0.2
-0.1
+0.2
stress
Carbenicillin 0.04 mg/ml
N.D.
+0.0
+0.0
+0.2
+0.2
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ABZR86_RS05035
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ABZR86_RS05045
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