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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS04755 and ABZR86_RS04760 overlap by 4 nucleotides
ABZR86_RS04760 and ABZR86_RS04765 are separated by 286 nucleotides
ABZR86_RS04765 and ABZR86_RS04770 are separated by 101 nucleotides
ABZR86_RS04770 and ABZR86_RS04775 are separated by 81 nucleotides
ABZR86_RS04755: ABZR86_RS04755 - acetyltransferase, at 1,065,762 to 1,066,427
_RS04755
ABZR86_RS04760: ABZR86_RS04760 - FdtA/QdtA family cupin domain-containing protein, at 1,066,424 to 1,066,849
_RS04760
ABZR86_RS04765: ABZR86_RS04765 - cytochrome b/b6 domain-containing protein, at 1,067,136 to 1,067,708
_RS04765
ABZR86_RS04770: ABZR86_RS04770 - cytochrome C, at 1,067,810 to 1,069,087
_RS04770
ABZR86_RS04775: ABZR86_RS04775 - c-type cytochrome, at 1,069,169 to 1,069,504
_RS04775
Group
Condition
ABZR86
_RS04755
ABZR86
_RS04760
ABZR86
_RS04765
ABZR86
_RS04770
ABZR86
_RS04775
stress
Fusidic 0.4 mg/ml
-0.3
+0.1
-0.6
+0.0
-0.0
stress
Spectinomycin 0.04 mg/ml
+0.0
-0.1
-0.4
-0.1
-0.3
stress
Sisomicin 0.016 mg/ml
-0.4
-0.1
-0.1
-0.0
-0.2
stress
Tetracycline 0.024 mg/ml
-0.3
-0.1
-0.5
-0.3
+0.4
stress
Nalidixic 0.04 mg/ml
-0.4
-0.2
+0.0
+0.0
-0.2
nitrogen source
L-Lysine (N)
-0.5
-0.2
+0.1
-0.2
-0.0
lb
LB
-0.3
-0.3
+0.1
-0.0
-0.1
stress
Thallium(I) acetate 0.008 mg/ml
-0.2
-0.1
-0.3
+0.0
-0.1
nitrogen source
L-Arginine (N)
+0.1
-0.1
-0.4
-0.2
-0.2
carbon source
a-Cyclodextrin (C)
-0.4
-0.0
-0.1
-0.2
+0.1
stress
Nalidixic 0.08 mg/ml
-0.6
+0.2
-0.4
-0.1
+0.1
stress
Zinc 2.5 mM
+0.2
-0.2
-0.5
-0.1
-0.1
stress
sodium fluoride 40 mM
-0.2
+0.3
-0.4
-0.1
-0.2
stress
Fusidic 0.2 mg/ml
+0.2
-0.2
-0.2
-0.1
-0.3
stress
Chloride 250 mM
+0.3
+0.0
-0.5
-0.1
-0.3
nitrogen source
Glucuronamide (N)
+0.2
+0.0
-0.3
-0.3
-0.1
stress
Paraquat dichloride 0.2 mg/ml
-0.0
+0.2
-0.5
-0.1
-0.1
carbon source
a-Cyclodextrin (C)
-0.3
+0.2
-0.4
-0.0
+0.1
carbon source
pyruvate (C)
-0.2
-0.2
+0.2
-0.2
-0.1
carbon source
D-Fructose (C)
-0.1
-0.3
-0.2
+0.0
+0.2
stress
Chlorite 0.32 mM
-0.3
+0.1
+0.1
+0.0
-0.2
carbon source
D-Cellobiose (C)
-0.3
+0.1
-0.2
-0.1
+0.2
carbon source
D-Glucose (C)
+0.3
-0.1
-0.5
-0.1
+0.1
carbon source
L-Proline (C)
-0.2
+0.2
-0.2
-0.1
+0.1
carbon source
D-Galactose (C)
+0.0
-0.0
+0.2
-0.1
-0.3
lb
LB
+0.1
+0.0
+0.2
-0.2
-0.3
stress
Chloramphenicol 0.012 mg/ml
+0.2
-0.2
-0.2
-0.2
+0.2
lb
LB
-0.6
+0.2
+0.1
+0.0
+0.1
stress
Paraquat dichloride 0.05 mg/ml
+0.4
+0.1
-0.3
-0.0
-0.0
nitrogen source
L-Asparagine (N)
-0.1
-0.0
+1.1
-0.0
-0.4
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