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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS04700 and ABZR86_RS04705 are separated by 12 nucleotides
ABZR86_RS04705 and ABZR86_RS04710 overlap by 4 nucleotides
ABZR86_RS04710 and ABZR86_RS04715 are separated by 40 nucleotides
ABZR86_RS04715 and ABZR86_RS04720 are separated by 570 nucleotides
ABZR86_RS04700: ABZR86_RS04700 - radical SAM protein, at 1,053,750 to 1,055,249
_RS04700
ABZR86_RS04705: ABZR86_RS04705 - class I SAM-dependent methyltransferase, at 1,055,262 to 1,055,957
_RS04705
ABZR86_RS04710: ABZR86_RS04710 - amidohydrolase family protein, at 1,055,954 to 1,057,111
_RS04710
ABZR86_RS04715: ABZR86_RS04715 - class I SAM-dependent methyltransferase, at 1,057,152 to 1,058,012
_RS04715
ABZR86_RS04720: ABZR86_RS04720 - Wzz/FepE/Etk N-terminal domain-containing protein, at 1,058,583 to 1,059,404
_RS04720
Group
Condition
ABZR86
_RS04700
ABZR86
_RS04705
ABZR86
_RS04710
ABZR86
_RS04715
ABZR86
_RS04720
nitrogen source
L-Asparagine (N)
-0.1
-0.6
+0.3
-0.4
-0.8
carbon source
NAG (C)
-0.0
-0.3
-0.3
+0.0
-0.2
stress
Fusidic 0.2 mg/ml
-0.4
-0.1
-0.0
-0.3
-0.0
stress
Tetracycline 0.024 mg/ml
-0.3
-0.3
+0.1
-0.3
+0.1
stress
Ceftazidime 0.1 mg/ml
-0.1
-0.1
-0.1
-0.2
-0.2
stress
Thallium(I) acetate 0.008 mg/ml
-0.1
-0.4
-0.1
+0.0
-0.0
stress
Carbenicillin 0.02 mg/ml
+0.0
-0.1
+0.0
-0.2
-0.2
lb
LB
-0.1
-0.1
-0.2
+0.1
-0.2
carbon source
D-Cellobiose (C)
-0.0
-0.3
-0.1
-0.0
+0.1
nitrogen source
L-Lysine (N)
-0.1
+0.1
-0.2
-0.2
-0.1
carbon source
NAG (C)
+0.0
-0.1
-0.1
+0.1
-0.2
stress
Carbenicillin 0.04 mg/ml
-0.1
-0.3
+0.1
-0.0
+0.1
nitrogen source
nitrate (N)
-0.1
+0.2
-0.1
-0.0
-0.1
stress
Nalidixic 0.08 mg/ml
-0.3
-0.1
+0.1
-0.0
+0.2
stress
Chloramphenicol 0.008 mg/ml
+0.1
+0.2
-0.1
-0.2
-0.2
carbon source
pyruvate (C)
+0.1
-0.2
-0.0
-0.0
+0.2
stress
Cisplatin 0.0032 mg/ml
-0.1
+0.4
+0.1
-0.0
-0.2
nitrogen source
L-Isoleucine (N)
-0.1
+0.1
-0.0
+0.3
-0.1
stress
Sisomicin 0.016 mg/ml
+0.1
+0.2
-0.0
-0.1
-0.1
lb
LB
+0.2
+0.1
+0.2
-0.1
-0.1
carbon source
D-Glucose (C)
+0.0
+0.1
-0.1
-0.0
+0.3
carbon source
L-Proline (C)
+0.1
-0.2
-0.0
+0.2
+0.2
nitrogen source
L-Leucine (N)
+0.1
+0.2
+0.1
+0.2
-0.1
stress
Paraquat dichloride 0.2 mg/ml
-0.1
+0.2
+0.0
+0.0
+0.3
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.1
+0.3
+0.1
+0.1
+0.1
carbon source
D-Cellobiose (C)
+0.0
+0.2
-0.0
+0.1
+0.2
stress
A22 0.02 mg/ml
-0.0
+0.1
+0.3
+0.0
+0.3
lb
LB
+0.0
+0.4
+0.0
+0.1
+0.2
carbon source
D-Fructose (C)
+0.1
+0.2
+0.0
+0.2
+0.2
nitrogen source
L-Proline (N)
+0.1
+0.2
+0.2
+0.1
+0.4
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