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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS04450 and ABZR86_RS04455 are separated by 295 nucleotides
ABZR86_RS04455 and ABZR86_RS04460 are separated by 205 nucleotides
ABZR86_RS04460 and ABZR86_RS04465 are separated by 34 nucleotides
ABZR86_RS04465 and ABZR86_RS04470 are separated by 60 nucleotides
ABZR86_RS04450: ABZR86_RS04450 - cytochrome-c oxidase, cbb3-type subunit I, at 994,267 to 995,709
_RS04450
ABZR86_RS04455: ABZR86_RS04455 - oxygen-independent coproporphyrinogen III oxidase, at 996,005 to 997,405
_RS04455
ABZR86_RS04460: ABZR86_RS04460 - NAD-dependent succinate-semialdehyde dehydrogenase, at 997,611 to 999,029
_RS04460
ABZR86_RS04465: ABZR86_RS04465 - alcohol dehydrogenase AdhP, at 999,064 to 1,000,095
_RS04465
ABZR86_RS04470: ABZR86_RS04470 - oleate hydratase, at 1,000,156 to 1,001,922
_RS04470
Group
Condition
ABZR86
_RS04450
ABZR86
_RS04455
ABZR86
_RS04460
ABZR86
_RS04465
ABZR86
_RS04470
stress
nitrite 6 mM
-0.6
-0.3
-0.1
-0.1
-0.1
carbon source
D-Fructose (C)
-0.1
-0.1
-0.2
-0.3
-0.0
carbon source
D-Fructose (C)
-0.1
+0.0
-0.3
-0.3
-0.0
stress
nitrate 150 mM
-0.3
-0.0
-0.1
-0.0
-0.0
carbon source
a-Cyclodextrin (C)
-0.0
+0.0
-0.3
-0.2
-0.1
carbon source
D-Cellobiose (C)
-0.0
-0.1
-0.1
-0.2
-0.1
carbon source
a-Cyclodextrin (C)
-0.0
-0.1
-0.1
-0.2
-0.0
carbon source
D-Cellobiose (C)
-0.1
-0.0
-0.1
-0.2
-0.0
nitrogen source
L-Arginine (N)
-0.0
-0.0
-0.2
-0.1
-0.1
carbon source
D-Glucose (C)
-0.0
-0.1
-0.1
-0.1
-0.1
carbon source
pyruvate (C)
-0.0
-0.0
-0.1
-0.1
-0.1
carbon source
D-Maltose (C)
-0.0
-0.0
-0.1
-0.1
-0.1
stress
Chloride 250 mM
-0.0
+0.0
-0.2
-0.2
-0.0
carbon source
NAG (C)
-0.0
+0.0
-0.1
-0.1
-0.1
carbon source
pyruvate (C)
-0.0
-0.1
-0.1
+0.0
-0.1
carbon source
D-Galactose (C)
-0.0
+0.0
-0.1
-0.1
-0.0
lb
LB
+0.0
+0.0
-0.1
-0.1
-0.1
stress
Fusidic 0.4 mg/ml
+0.0
+0.0
-0.2
-0.1
+0.1
nitrogen source
nitrate (N)
+0.0
+0.1
-0.0
-0.2
+0.0
stress
Zinc 2.5 mM
+0.1
+0.1
-0.1
-0.2
+0.1
carbon source
NAG (C)
-0.0
+0.1
-0.0
-0.1
-0.0
stress
Nalidixic 0.01 mg/ml
-0.2
+0.0
+0.0
+0.0
+0.0
nitrogen source
L-Asparagine (N)
-0.0
+0.1
+0.0
-0.0
-0.1
stress
Spectinomycin 0.04 mg/ml
+0.0
+0.1
-0.1
-0.0
-0.1
stress
Chloramphenicol 0.012 mg/ml
+0.0
+0.1
-0.0
-0.1
+0.1
lb
LB
-0.1
+0.2
+0.0
+0.0
-0.1
stress
Nalidixic 0.08 mg/ml
+0.0
-0.1
+0.1
+0.2
-0.1
stress
Carbenicillin 0.04 mg/ml
+0.0
-0.1
+0.0
+0.2
+0.1
stress
Tetracycline 0.024 mg/ml
-0.0
-0.1
+0.1
+0.1
+0.1
lb
LB
+0.0
+0.0
+0.1
+0.1
+0.1
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