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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS04030 and ABZR86_RS04035 are separated by 80 nucleotides
ABZR86_RS04035 and ABZR86_RS04040 are separated by 228 nucleotides
ABZR86_RS04040 and ABZR86_RS04045 are separated by 60 nucleotides
ABZR86_RS04045 and ABZR86_RS04050 are separated by 146 nucleotides
ABZR86_RS04030: ABZR86_RS04030 - SDR family oxidoreductase, at 887,648 to 888,430
_RS04030
ABZR86_RS04035: ABZR86_RS04035 - LysR substrate-binding domain-containing protein, at 888,511 to 889,425
_RS04035
ABZR86_RS04040: ABZR86_RS04040 - heme-binding protein, at 889,654 to 890,184
_RS04040
ABZR86_RS04045: ABZR86_RS04045 - sialidase family protein, at 890,245 to 891,276
_RS04045
ABZR86_RS04050: ABZR86_RS04050 - DMT family transporter, at 891,423 to 892,286
_RS04050
Group
Condition
ABZR86
_RS04030
ABZR86
_RS04035
ABZR86
_RS04040
ABZR86
_RS04045
ABZR86
_RS04050
carbon source
D-Galactose (C)
-0.1
+0.1
-0.1
-0.5
-0.6
nitrogen source
L-Asparagine (N)
+0.5
-0.9
-0.9
+0.0
+0.2
carbon source
D-Fructose (C)
-0.0
-0.4
-0.1
-0.3
-0.3
stress
Sisomicin 0.016 mg/ml
-0.2
-0.1
-0.4
-0.1
-0.2
lb
LB
+0.1
-0.1
-0.6
-0.3
+0.1
stress
Dimethyl Sulfoxide 7.5 vol%
-0.2
-0.1
-0.2
-0.4
+0.1
stress
Paraquat dichloride 0.05 mg/ml
-0.0
-0.2
-0.1
-0.4
-0.1
stress
A22 0.01 mg/ml
-0.2
-0.3
-0.1
-0.2
-0.0
stress
Paraquat dichloride 0.1 mg/ml
-0.1
-0.2
-0.3
-0.2
+0.2
stress
Nalidixic 0.08 mg/ml
+0.4
-0.0
-0.4
-0.3
-0.3
carbon source
NAG (C)
-0.1
-0.0
+0.1
-0.3
-0.2
stress
Chlorite 0.32 mM
-0.3
+0.0
-0.3
+0.1
-0.1
carbon source
NAG (C)
+0.0
+0.2
-0.1
-0.3
-0.4
nitrogen source
L-Isoleucine (N)
-0.2
+0.2
-0.1
-0.0
-0.3
carbon source
a-Cyclodextrin (C)
-0.1
+0.2
-0.2
-0.2
-0.1
carbon source
L-Alanine (C)
-0.1
+0.1
+0.2
-0.3
-0.3
stress
sodium fluoride 60 mM
-0.1
-0.2
+0.0
-0.3
+0.2
stress
Nalidixic 0.04 mg/ml
+0.1
+0.2
-0.2
-0.3
-0.1
stress
Nalidixic 0.02 mg/ml
+0.2
+0.1
+0.1
-0.2
-0.3
carbon source
pyruvate (C)
-0.2
+0.2
+0.2
-0.0
-0.2
carbon source
D-Cellobiose (C)
-0.2
+0.4
-0.1
-0.1
+0.1
stress
Fusidic 0.4 mg/ml
-0.2
-0.3
-0.1
-0.1
+0.8
nitrogen source
nitrate (N)
-0.1
-0.1
+0.2
-0.1
+0.3
stress
Chloramphenicol 0.012 mg/ml
+0.2
-0.2
+0.2
-0.1
+0.1
carbon source
a-Cyclodextrin (C)
-0.3
+0.2
-0.1
+0.7
-0.2
stress
Fusidic 0.2 mg/ml
+0.6
-0.1
-0.4
-0.1
+0.2
carbon source
L-Proline (C)
+0.1
+0.5
-0.1
-0.0
-0.2
stress
Thallium(I) acetate 0.016 mg/ml
-0.0
-0.1
+0.2
-0.1
+0.3
stress
Paraquat dichloride 0.2 mg/ml
+0.0
+0.1
+0.2
-0.3
+0.4
stress
Chloramphenicol 0.008 mg/ml
+0.1
+0.1
+0.3
+0.2
+0.3
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