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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS03950 and ABZR86_RS03955 are separated by 202 nucleotides
ABZR86_RS03955 and ABZR86_RS03960 overlap by 4 nucleotides
ABZR86_RS03960 and ABZR86_RS03965 are separated by 185 nucleotides
ABZR86_RS03965 and ABZR86_RS03970 are separated by 59 nucleotides
ABZR86_RS03950: ABZR86_RS03950 - RidA family protein, at 865,256 to 865,717
_RS03950
ABZR86_RS03955: ABZR86_RS03955 - DEAD/DEAH box helicase, at 865,920 to 868,328
_RS03955
ABZR86_RS03960: ABZR86_RS03960 - ribonuclease H-like domain-containing protein, at 868,325 to 869,149
_RS03960
ABZR86_RS03965: ABZR86_RS03965 - sterol desaturase family protein, at 869,335 to 870,351
_RS03965
ABZR86_RS03970: ABZR86_RS03970 - sugar-binding domain-containing protein, at 870,411 to 872,279
_RS03970
Group
Condition
ABZR86
_RS03950
ABZR86
_RS03955
ABZR86
_RS03960
ABZR86
_RS03965
ABZR86
_RS03970
stress
Cisplatin 0.0032 mg/ml
+0.0
-1.9
-1.7
+0.0
+0.1
stress
Sisomicin 0.016 mg/ml
-0.2
+0.0
-0.2
-0.1
+0.1
stress
Thallium(I) acetate 0.008 mg/ml
-0.1
-0.1
+0.1
-0.2
-0.0
stress
D-Cycloserine 0.032 mg/ml
-0.1
+0.0
-0.2
-0.1
+0.1
lb
LB
-0.0
-0.0
-0.4
+0.2
+0.0
lb
LB
-0.3
+0.1
+0.1
-0.2
-0.0
carbon source
D-Galactose (C)
-0.4
-0.0
+0.1
-0.1
+0.1
carbon source
D-Fructose (C)
-0.2
+0.1
-0.1
-0.1
+0.1
stress
Tetracycline 0.024 mg/ml
-0.4
-0.0
+0.0
+0.0
+0.2
stress
nitrite 6 mM
-0.3
+0.1
-0.0
+0.0
+0.1
carbon source
D-Cellobiose (C)
-0.2
+0.1
-0.1
+0.2
-0.1
stress
Chloride 250 mM
+0.2
-0.0
-0.2
-0.1
-0.0
nitrogen source
L-Asparagine (N)
-0.2
-0.0
+0.1
-0.1
+0.1
carbon source
pyruvate (C)
-0.2
+0.0
+0.3
+0.0
-0.1
nitrogen source
L-Leucine (N)
+0.2
-0.0
+0.1
-0.2
-0.0
stress
Fusidic 0.4 mg/ml
+0.4
+0.1
-0.1
-0.0
-0.0
nitrogen source
L-Isoleucine (N)
+0.1
+0.1
+0.1
-0.1
+0.1
nitrogen source
L-Lysine (N)
-0.2
+0.1
+0.2
+0.2
+0.1
stress
perchlorate 75 mM
+0.2
+0.1
+0.1
-0.0
+0.1
carbon source
D-Glucose (C)
+0.0
+0.1
+0.2
+0.0
+0.1
stress
Paraquat dichloride 0.2 mg/ml
+0.1
+0.1
+0.2
-0.0
+0.1
carbon source
D-Maltose (C)
+0.1
+0.1
+0.1
+0.2
+0.0
nitrogen source
N-Acetyl-D-glucosamine (N)
+0.0
+0.2
+0.2
+0.0
+0.0
carbon source
L-Proline (C)
+0.2
+0.0
+0.2
-0.0
+0.1
stress
sodium fluoride 60 mM
+0.2
+0.1
+0.2
+0.1
+0.0
stress
Chloramphenicol 0.012 mg/ml
+0.2
+0.0
+0.3
-0.0
+0.2
stress
Nalidixic 0.02 mg/ml
+0.1
+0.5
+0.2
-0.1
-0.0
stress
Nalidixic 0.08 mg/ml
+0.1
+0.8
+0.3
+0.1
-0.1
stress
Nalidixic 0.01 mg/ml
+0.0
+0.4
+0.6
+0.1
+0.0
stress
Nalidixic 0.04 mg/ml
+0.2
+0.8
+0.9
+0.1
+0.1
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