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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS03580 and ABZR86_RS03585 are separated by 265 nucleotides
ABZR86_RS03585 and ABZR86_RS03590 are separated by 5 nucleotides
ABZR86_RS03590 and ABZR86_RS03595 are separated by 89 nucleotides
ABZR86_RS03595 and ABZR86_RS03600 are separated by 100 nucleotides
ABZR86_RS03580: ABZR86_RS03580 - ABC transporter ATP-binding protein, at 763,757 to 764,752
_RS03580
ABZR86_RS03585: ABZR86_RS03585 - FdhF/YdeP family oxidoreductase, at 765,018 to 767,342
_RS03585
ABZR86_RS03590: ABZR86_RS03590 - formate dehydrogenase accessory sulfurtransferase FdhD, at 767,348 to 768,166
_RS03590
ABZR86_RS03595: ABZR86_RS03595 - FAD-containing oxidoreductase, at 768,256 to 769,626
_RS03595
ABZR86_RS03600: ABZR86_RS03600 - TMEM175 family protein, at 769,727 to 770,368
_RS03600
Group
Condition
ABZR86
_RS03580
ABZR86
_RS03585
ABZR86
_RS03590
ABZR86
_RS03595
ABZR86
_RS03600
stress
Chloramphenicol 0.012 mg/ml
-0.8
-0.1
-0.2
-0.0
+0.0
stress
Nalidixic 0.08 mg/ml
-0.0
-0.2
-0.0
-0.5
-0.2
carbon source
a-Cyclodextrin (C)
-0.3
-0.1
-0.3
-0.1
-0.0
carbon source
D-Cellobiose (C)
-0.7
-0.1
-0.1
-0.0
+0.1
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.3
-0.1
-0.0
-0.2
-0.1
stress
Fusidic 0.2 mg/ml
-0.2
+0.1
+0.1
-0.3
-0.3
nitrogen source
L-Arginine (N)
-0.3
-0.1
+0.2
-0.1
-0.2
stress
A22 0.01 mg/ml
-0.6
-0.1
+0.2
-0.1
+0.1
carbon source
D-Cellobiose (C)
-0.8
-0.2
+0.0
+0.1
+0.4
carbon source
pyruvate (C)
-0.4
-0.2
+0.1
-0.0
+0.2
nitrogen source
nitrate (N)
-1.1
+0.3
+0.2
+0.1
+0.3
stress
Nalidixic 0.02 mg/ml
-0.3
+0.0
+0.1
+0.1
-0.2
nitrogen source
L-Asparagine (N)
+0.6
+0.2
-0.1
+0.1
-1.0
carbon source
NAG (C)
-0.3
-0.0
-0.1
+0.0
+0.3
nitrogen source
L-Isoleucine (N)
+0.2
-0.2
-0.1
-0.2
+0.2
stress
Fusidic 0.4 mg/ml
+0.4
-0.0
-0.1
-0.0
-0.3
lb
LB
+0.5
-0.1
+0.1
-0.1
-0.2
lb
LB
+0.3
+0.3
+0.2
-0.3
-0.4
carbon source
L-Alanine (C)
+0.3
+0.1
-0.2
+0.2
-0.1
stress
Nalidixic 0.01 mg/ml
+0.5
+0.1
-0.1
-0.0
-0.2
stress
A22 0.02 mg/ml
+0.5
-0.1
-0.3
-0.1
+0.3
carbon source
a-Cyclodextrin (C)
-0.4
+0.1
+0.1
+0.1
+0.4
stress
Tetracycline 0.024 mg/ml
+0.6
+0.0
-0.2
-0.2
+0.2
stress
Spectinomycin 0.04 mg/ml
+0.4
-0.0
+0.4
-0.1
-0.1
nitrogen source
L-Leucine (N)
+0.4
-0.0
+0.1
-0.1
+0.0
stress
Thallium(I) acetate 0.016 mg/ml
+0.3
-0.1
+0.2
-0.0
+0.2
stress
Sisomicin 0.016 mg/ml
+0.3
-0.0
+0.2
-0.1
+0.0
stress
Ceftazidime 0.05 mg/ml
+0.3
+0.0
-0.1
+0.2
+0.1
stress
Chloramphenicol 0.008 mg/ml
+0.7
-0.1
+0.1
+0.1
-0.1
lb
LB
+0.3
+0.1
-0.0
+0.1
+0.2
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